Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 MIR1254-2-201ENST00000579553 63 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 UBE2L4-201ENST00000587688 464 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AP001269.3-201ENST00000588718 329 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AL451007.1-201ENST00000595491 289 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AP000403.1-201ENST00000603349 851 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AC004805.2-201ENST00000605382 482 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AL158801.5-201ENST00000623123 465 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 MIR1291-201ENST00000627649 87 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AC080128.1-201ENST00000474389 1917 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 MTND4P27-201ENST00000450813 1354 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC099786.3-201ENST00000565735 1410 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 SNORA38-201ENST00000363946 132 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 SNORD46.1-201ENST00000364139 104 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 RNU6-1083P-201ENST00000384022 107 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 MIR23B-201ENST00000384832 97 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 MIR34A-201ENST00000385130 110 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 U3.26-201ENST00000391236 204 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AL359511.1-201ENST00000402970 211 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 RNU2-52P-201ENST00000410680 190 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 HMGB1P9-201ENST00000429856 646 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 FCF1P1-201ENST00000432690 571 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 IFNA11P-201ENST00000446352 526 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AP000542.1-201ENST00000448473 371 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC011753.1-201ENST00000451001 220 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 MRPL42P6-201ENST00000486397 371 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC021146.8-201ENST00000507455 733 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC026436.1-201ENST00000510537 270 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 RNU6-927P-201ENST00000516199 100 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC069431.2-201ENST00000604149 1099 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.11□□□□□ -2.07
CLN6Q9NWW5 MIR6895-201ENST00000613497 78 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 CKAP2P1-201ENST00000555477 2049 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 ELF2P3-201ENST00000445099 1506 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 AC010889.1-201ENST00000566193 2666 ntBASIC2.11□□□□□ -2.07
CLN6Q9NWW5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AC110491.1-201ENST00000562191 2010 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLN6Q9NWW5 OR5J1P-201ENST00000313544 939 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLN6Q9NWW5 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CLN6Q9NWW5 MIR518C-201ENST00000384822 101 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 RNU6-1328P-201ENST00000410938 106 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 MTCO1P17-201ENST00000411522 491 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 RPL21P24-201ENST00000413752 448 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AC083875.1-201ENST00000419509 405 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AC019097.1-201ENST00000424783 735 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AC063976.3-201ENST00000426849 329 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AC020550.1-201ENST00000447385 163 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AL139109.1-201ENST00000455491 297 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AC005410.1-202ENST00000460347 485 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AC023141.11-201ENST00000508864 202 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 RNA5SP216-201ENST00000516111 123 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.1□□□□□ -2.07
CLN6Q9NWW5 MTCO2P15-201ENST00000532655 656 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AC135628.1-201ENST00000568867 534 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 MYL12BP1-201ENST00000569826 507 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AC024619.4-201ENST00000580924 316 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.1□□□□□ -2.07
CLN6Q9NWW5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.1□□□□□ -2.07
CLN6Q9NWW5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.1□□□□□ -2.07
CLN6Q9NWW5 VN1R90P-201ENST00000595717 726 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 MTND3P19-201ENST00000603825 345 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AL121917.1-203ENST00000605534 577 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AC245884.12-201ENST00000615364 59 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.1□□□□□ -2.07
CLN6Q9NWW5 MIR3199-2-201ENST00000636243 86 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 AC099654.8-201ENST00000637757 681 ntBASIC2.1□□□□□ -2.07
CLN6Q9NWW5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLN6Q9NWW5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms