Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 OR2AS2P-201ENST00000606902 342 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC245517.5-201ENST00000611529 162 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC090970.3-201ENST00000612566 866 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC096644.4-201ENST00000563417 2912 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 SNORD116-2-201ENST00000384274 95 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 RNU6-809P-201ENST00000384461 107 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 SNORD116-6-201ENST00000384711 96 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 MRPL50P2-201ENST00000416821 482 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 NPM1P11-201ENST00000417106 855 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 MED14P1-201ENST00000430517 648 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AC244505.4-201ENST00000434905 287 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 SETP8-201ENST00000435341 628 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 TRIM60P18-201ENST00000441518 828 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 SSXP5-201ENST00000443473 287 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AC010631.1-201ENST00000474150 156 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 OR5BM1P-201ENST00000512021 366 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 RNU6-64P-201ENST00000517119 105 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AP002748.2-201ENST00000528671 348 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AC007115.1-201ENST00000546853 234 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AP005136.1-201ENST00000579765 429 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 GLUD1P4-201ENST00000590914 418 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AC079089.3-201ENST00000603094 673 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AL022161.1-201ENST00000604390 213 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AL161729.4-201ENST00000604650 476 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AL031775.1-201ENST00000607014 887 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AC093732.2-201ENST00000607950 274 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 MTND1P37-201ENST00000636562 264 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 AC009487.2-201ENST00000420969 6821 ntBASIC3.66□□□□□ -1.82
SMC4Q9NTJ3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SMC4Q9NTJ3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SMC4Q9NTJ3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 U8.9-201ENST00000365667 134 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 RNU6-851P-201ENST00000384565 107 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 MT-TH-201ENST00000387441 69 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 RNA5SP252-201ENST00000391131 119 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 RNU1-101P-201ENST00000391171 127 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 SNORA26.7-201ENST00000391288 122 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 UBA52P6-201ENST00000399822 382 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 MIR887-201ENST00000401258 79 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 RNA5SP344-201ENST00000411081 104 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 AC090960.1-201ENST00000421072 306 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 RPS29P6-201ENST00000438196 145 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 AC010099.1-201ENST00000455434 375 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 AC013267.1-201ENST00000458227 267 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 AC080014.1-201ENST00000496877 1201 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 RNU6-927P-201ENST00000516199 100 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 AC025881.1-201ENST00000518851 512 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 AP000867.2-201ENST00000532468 320 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 AC010653.1-201ENST00000571108 881 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 MIR3146-201ENST00000580367 79 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 AC110760.3-201ENST00000598794 467 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 AL355596.1-201ENST00000565399 3996 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 AC091564.4-201ENST00000533934 2194 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.65□□□□□ -1.83
SMC4Q9NTJ3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 RPL9P7-201ENST00000330965 580 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 SNORA18.3-201ENST00000384122 132 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 SNORA26.8-201ENST00000391306 124 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 MIR1302-8-201ENST00000408342 128 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 HSPE1P1-201ENST00000421494 318 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 MTND1P30-201ENST00000441241 901 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 PIGFP3-201ENST00000441918 722 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 MTND2P4-201ENST00000445034 1004 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 AP000797.1-201ENST00000478870 387 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 AC011825.1-201ENST00000484967 388 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms