Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MTCO3P13-201ENST00000577757 781 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 MIR3124-201ENST00000582636 67 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AC107871.2-201ENST00000612894 502 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AL031667.3-201ENST00000620124 655 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AC012150.2-201ENST00000621300 544 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AC097520.1-201ENST00000624435 385 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AC243829.7-201ENST00000633081 225 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AC092125.1-201ENST00000562568 1995 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 MTND4P16-201ENST00000466108 1367 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
HPS4Q9NQG7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AC007785.2-201ENST00000598627 1916 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 MIR181B1-201ENST00000385240 110 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 RN7SKP284-201ENST00000411002 343 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 RN7SKP140-201ENST00000411196 284 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AL451074.5-201ENST00000415894 435 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AL512844.2-201ENST00000433990 593 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 RPL32P28-201ENST00000443577 397 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 MTCYBP3-201ENST00000445588 1137 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 CBWD4P-201ENST00000445695 655 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 LARP1BP2-201ENST00000486594 519 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AC117522.3-201ENST00000507974 584 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 SNORA31.21-201ENST00000517180 77 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 ELOCP32-201ENST00000548625 324 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AF038458.1-201ENST00000588406 262 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 TPMTP1-201ENST00000592307 737 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AC023043.3-201ENST00000593113 385 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AC018714.1-201ENST00000605028 208 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AC010133.1-201ENST00000615809 842 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 Z99129.2-201ENST00000619967 314 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 MIR6733-201ENST00000635723 61 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AL049641.1-201ENST00000441055 1948 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 AC135776.4-201ENST00000624300 1904 ntBASIC2.85□□□□□ -1.95
HPS4Q9NQG7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 CCT4P2-201ENST00000233836 1548 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 XGY1-201ENST00000381172 446 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AC119751.3-201ENST00000399720 670 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AL109755.1-201ENST00000401791 649 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 Z85995.1-201ENST00000415547 335 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AC098592.1-201ENST00000419352 333 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AC010099.3-201ENST00000423896 409 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 RPL7P36-201ENST00000444633 681 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 snoU13.28-201ENST00000459235 104 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AP002748.2-201ENST00000528671 348 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AC007954.1-201ENST00000554198 494 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 MIR4446-201ENST00000578505 67 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AC008739.2-201ENST00000597006 317 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 AP000811.1-201ENST00000603803 651 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 SDR42E1P2-201ENST00000614861 481 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.84□□□□□ -1.95
HPS4Q9NQG7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.95
HPS4Q9NQG7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms