Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Y_RNA.100-201ENST00000363141 102 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 RNA5SP51-201ENST00000364750 119 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 RNU2-71P-201ENST00000411395 189 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 ATP5A1P2-201ENST00000412323 255 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.28□□□□□ -1.72
VTA1Q9NP79 NDUFB4P7-201ENST00000423198 363 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 RPL7P46-201ENST00000425129 740 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AL590383.1-201ENST00000428602 75 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.28□□□□□ -1.72
VTA1Q9NP79 AL591704.1-201ENST00000432574 275 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 RPL23AP83-201ENST00000434984 473 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 TXNP1-201ENST00000441872 371 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 RPS3AP46-201ENST00000448352 682 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 RPL21P8-201ENST00000465083 535 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 RPL39P36-201ENST00000490784 156 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC025554.1-201ENST00000505641 188 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC092436.1-201ENST00000506450 503 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC110768.1-201ENST00000509222 400 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC026726.1-201ENST00000512859 601 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.28□□□□□ -1.72
VTA1Q9NP79 AL137161.1-201ENST00000532231 390 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC011712.1-201ENST00000588959 234 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC010525.2-201ENST00000590920 195 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC244505.7-201ENST00000599675 272 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AL138889.2-201ENST00000603883 242 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AL035413.2-201ENST00000604801 525 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC007179.3-201ENST00000604976 235 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 LARP7P1-201ENST00000605576 316 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC012409.4-201ENST00000612923 249 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC004825.2-201ENST00000616634 455 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 C2orf27A-204ENST00000623058 969 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 MTND5P42-201ENST00000637720 498 ntBASIC4.28□□□□□ -1.72
VTA1Q9NP79 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTA1Q9NP79 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.28□□□□□ -1.72
VTA1Q9NP79 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTA1Q9NP79 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
VTA1Q9NP79 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VTA1Q9NP79 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
VTA1Q9NP79 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
VTA1Q9NP79 MTND4P12-201ENST00000498999 1377 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 ASNSP3-201ENST00000451989 1306 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 AC010733.2-201ENST00000589496 5702 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 Y_RNA.231-201ENST00000364358 102 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VTA1Q9NP79 RNU6-190P-201ENST00000384154 102 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 MIR183-201ENST00000384958 110 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 MIR34B-201ENST00000385076 84 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 MIR514A2-201ENST00000385131 88 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 MIR514A3-201ENST00000385132 88 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 MIR514A1-201ENST00000385133 98 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.27□□□□□ -1.73
VTA1Q9NP79 AC080125.1-201ENST00000414888 684 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.27□□□□□ -1.73
VTA1Q9NP79 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.27□□□□□ -1.73
VTA1Q9NP79 ERLEC1P1-201ENST00000433806 578 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VTA1Q9NP79 PRDX3P3-201ENST00000447765 522 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 RPL37P6-201ENST00000460682 294 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.27□□□□□ -1.73
VTA1Q9NP79 AC117522.3-201ENST00000507974 584 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 MTND4P7-201ENST00000523876 130 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 AC103843.2-201ENST00000530523 682 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.27□□□□□ -1.73
VTA1Q9NP79 MIR4424-201ENST00000585257 86 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 AC012468.1-201ENST00000604888 430 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 AC034102.8-201ENST00000615146 484 ntBASIC4.27□□□□□ -1.73
VTA1Q9NP79 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
VTA1Q9NP79 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VTA1Q9NP79 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.27□□□□□ -1.73
VTA1Q9NP79 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.27□□□□□ -1.73
VTA1Q9NP79 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.27□□□□□ -1.73
VTA1Q9NP79 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
VTA1Q9NP79 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTA1Q9NP79 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTA1Q9NP79 MAPK10-253ENST00000641010 4072 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 Y_RNA.86-201ENST00000363020 111 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 RNU6-82P-201ENST00000363970 107 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTA1Q9NP79 RNU6-1009P-201ENST00000390996 107 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 RN7SKP177-201ENST00000410567 355 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 RNU2-41P-201ENST00000410991 178 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 VDAC1P3-201ENST00000434069 851 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 AF228730.2-201ENST00000438784 848 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 MTND4LP16-201ENST00000440828 295 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VTA1Q9NP79 MTND3P16-201ENST00000452205 344 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 PMCHL2-203ENST00000457791 237 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 RNU7-180P-201ENST00000459240 63 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms