Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 RNA5SP72-201ENST00000364442 117 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 MIR141-201ENST00000384975 95 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 Y_RNA.578-201ENST00000390903 88 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 MIR937-201ENST00000401271 86 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 RNA5SP489-201ENST00000410986 109 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 OR4K6P-201ENST00000416478 897 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 MTCYBP38-201ENST00000417160 1123 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 AC003685.2-201ENST00000422795 395 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 MTND1P28-201ENST00000435623 950 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 MTATP6P30-201ENST00000443540 664 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 RN7SL542P-201ENST00000467147 294 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 RPS15AP36-201ENST00000492022 382 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 AP002802.2-201ENST00000605877 235 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 AC103810.6-201ENST00000606708 136 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 AC069294.1-201ENST00000608397 350 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 AL158163.2-201ENST00000619110 700 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 AC093591.3-201ENST00000634516 308 ntBASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VCX3AQ9NNX9 SNORA63.3-201ENST00000362682 132 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 Y_RNA.245-201ENST00000364493 95 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 SNORA56-201ENST00000383966 129 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 MTND1P21-201ENST00000412991 285 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AC093106.2-201ENST00000428212 385 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AL512649.1-201ENST00000428997 581 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 Z98742.2-201ENST00000431564 187 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AC080013.2-201ENST00000460866 323 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 RPL23AP41-201ENST00000484754 458 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 RNA5SP341-201ENST00000516261 117 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 MIR892C-201ENST00000516410 77 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 RNU1-103P-201ENST00000516502 125 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 MTCYBP20-201ENST00000524239 1129 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AL049838.1-201ENST00000563647 981 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AL132657.2-201ENST00000564417 358 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AC105245.1-201ENST00000581934 244 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 MIR4443-201ENST00000585052 53 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AC009159.1-201ENST00000618386 642 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AL512427.1-201ENST00000618593 349 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AP002791.1-201ENST00000623291 381 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AC104985.3-201ENST00000623479 597 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 AC091932.3-201ENST00000624223 323 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 HSPA8P4-201ENST00000511877 1920 ntBASIC1.97□□□□□ -2.09
VCX3AQ9NNX9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 Y_RNA.110-201ENST00000363220 99 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 SNORA62.3-201ENST00000365110 153 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 RNU6-432P-201ENST00000384196 109 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AL050321.1-201ENST00000432363 400 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AC124916.1-201ENST00000444020 547 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AP000936.2-201ENST00000447151 681 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 HMGB3P17-201ENST00000504195 649 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 RNA5SP165-201ENST00000517142 115 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 HMGN1P28-201ENST00000521340 364 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 CYCSP26-201ENST00000534107 320 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AL133241.1-201ENST00000556832 487 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AC021739.1-201ENST00000559631 174 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 MIR4765-201ENST00000585007 77 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AC107214.2-201ENST00000608204 634 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 AL121652.1-201ENST00000608851 448 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms