Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 HMGB1P12-201ENST00000438594 598 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 RPS15AP9-201ENST00000439856 381 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.57□□□□□ -1.84
CDT1Q9H211 MTND5P20-201ENST00000448677 143 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 MRPS31P2-201ENST00000451581 518 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 MTND1P12-201ENST00000455231 147 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AC108059.3-201ENST00000456388 214 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.57□□□□□ -1.84
CDT1Q9H211 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.57□□□□□ -1.84
CDT1Q9H211 RNU7-59P-201ENST00000459101 61 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 RPL21P104-201ENST00000464143 478 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.57□□□□□ -1.84
CDT1Q9H211 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.57□□□□□ -1.84
CDT1Q9H211 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AC093278.1-201ENST00000494700 600 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AC008628.2-201ENST00000502605 298 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 HMGB1P22-201ENST00000505315 124 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AC110794.1-201ENST00000505816 425 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.57□□□□□ -1.84
CDT1Q9H211 PHBP14-201ENST00000512887 367 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 SNORA20.3-201ENST00000516880 132 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.57□□□□□ -1.84
CDT1Q9H211 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.57□□□□□ -1.84
CDT1Q9H211 MTND1P35-201ENST00000526739 508 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.57□□□□□ -1.84
CDT1Q9H211 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.57□□□□□ -1.84
CDT1Q9H211 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.57□□□□□ -1.84
CDT1Q9H211 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.57□□□□□ -1.84
CDT1Q9H211 MIR5680-201ENST00000577577 84 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.57□□□□□ -1.84
CDT1Q9H211 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.57□□□□□ -1.84
CDT1Q9H211 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.57□□□□□ -1.84
CDT1Q9H211 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.57□□□□□ -1.84
CDT1Q9H211 AL022099.1-201ENST00000604551 712 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AL450472.3-201ENST00000615578 367 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDT1Q9H211 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDT1Q9H211 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AL136313.1-201ENST00000624804 202 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.57□□□□□ -1.84
CDT1Q9H211 CASC19-280ENST00000642102 1351 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDT1Q9H211 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CDT1Q9H211 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
CDT1Q9H211 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CDT1Q9H211 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDT1Q9H211 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDT1Q9H211 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
CDT1Q9H211 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDT1Q9H211 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDT1Q9H211 RNU5E-8P-201ENST00000363502 116 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 Y_RNA.295-201ENST00000364918 102 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDT1Q9H211 RNU6-1181P-201ENST00000384191 106 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 RNU6-328P-201ENST00000390887 106 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 RNU6-882P-201ENST00000391025 103 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 RNU6-754P-201ENST00000391166 107 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 RNU2-71P-201ENST00000411395 189 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.56□□□□□ -1.84
CDT1Q9H211 AC002486.1-201ENST00000435098 391 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 RPL35AP22-201ENST00000436855 335 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 MTND2P24-201ENST00000453434 806 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 AMD1P1-201ENST00000457220 922 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 RPS15AP36-201ENST00000492022 382 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 RN7SL504P-201ENST00000494496 287 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 RPL23AP55-201ENST00000498163 452 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 AC091951.2-201ENST00000500762 203 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.56□□□□□ -1.84
CDT1Q9H211 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.56□□□□□ -1.84
CDT1Q9H211 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.56□□□□□ -1.84
CDT1Q9H211 AC026801.2-201ENST00000515352 425 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 RNU6-358P-201ENST00000516564 75 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.56□□□□□ -1.84
CDT1Q9H211 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.56□□□□□ -1.84
CDT1Q9H211 AC022616.3-201ENST00000523940 148 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 AL512360.1-201ENST00000555346 234 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 AC025678.1-201ENST00000567861 338 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.56□□□□□ -1.84
CDT1Q9H211 AC012182.1-201ENST00000570133 895 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 MIR3690-201ENST00000580266 75 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 MIR3200-201ENST00000580767 85 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 AC005730.3-201ENST00000583067 366 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.56□□□□□ -1.84
CDT1Q9H211 AL035413.2-201ENST00000604801 525 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 AC008277.2-201ENST00000605196 797 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 AL034351.1-201ENST00000605288 668 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 AC008536.2-201ENST00000607284 349 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 AC093788.1-201ENST00000609356 927 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 uc_338.1-201ENST00000612113 180 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 AC093838.1-201ENST00000613014 469 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
CDT1Q9H211 AC104260.1-201ENST00000616660 539 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 MIR6130-201ENST00000619419 109 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.56□□□□□ -1.84
CDT1Q9H211 MIR1321-201ENST00000637766 79 ntBASIC3.56□□□□□ -1.84
CDT1Q9H211 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CDT1Q9H211 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.56□□□□□ -1.84
CDT1Q9H211 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDT1Q9H211 AP001350.1-201ENST00000601906 1524 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms