Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 RPS3AP14-201ENST00000483907 780 ntBASIC3.43□□□□□ -1.86
SDF4Q9BRK5 SNORA31.3-201ENST00000516029 96 ntBASIC3.43□□□□□ -1.86
SDF4Q9BRK5 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.43□□□□□ -1.86
SDF4Q9BRK5 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.43□□□□□ -1.86
SDF4Q9BRK5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.43□□□□□ -1.86
SDF4Q9BRK5 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.43□□□□□ -1.86
SDF4Q9BRK5 RPS3AP4-201ENST00000555161 764 ntBASIC3.43□□□□□ -1.86
SDF4Q9BRK5 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.43□□□□□ -1.86
SDF4Q9BRK5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.43□□□□□ -1.86
SDF4Q9BRK5 MIR3118-1-201ENST00000581787 76 ntBASIC3.43□□□□□ -1.86
SDF4Q9BRK5 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.43□□□□□ -1.86
SDF4Q9BRK5 AP001981.2-201ENST00000603241 418 ntBASIC3.43□□□□□ -1.86
SDF4Q9BRK5 AC093732.2-201ENST00000607950 274 ntBASIC3.43□□□□□ -1.86
SDF4Q9BRK5 FTX_3.1-201ENST00000610451 147 ntBASIC3.43□□□□□ -1.86
SDF4Q9BRK5 BX664608.1-201ENST00000610519 487 ntBASIC3.43□□□□□ -1.86
SDF4Q9BRK5 AC009878.1-201ENST00000621819 340 ntBASIC3.43□□□□□ -1.86
SDF4Q9BRK5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.43□□□□□ -1.86
SDF4Q9BRK5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.43□□□□□ -1.86
SDF4Q9BRK5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.43□□□□□ -1.86
SDF4Q9BRK5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 RNU6-140P-201ENST00000384566 108 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 MTND2P18-201ENST00000419962 1030 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AC006366.1-201ENST00000422002 759 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 RPL7P46-201ENST00000425129 740 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 CETN4P-201ENST00000432407 469 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 FCF1P1-201ENST00000432690 571 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 MTND1P12-201ENST00000455231 147 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 RNU7-23P-201ENST00000459465 62 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 RPL21P41-201ENST00000459863 264 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AC138853.1-201ENST00000503549 823 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AC114797.1-201ENST00000514003 728 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AC068135.2-201ENST00000569293 1028 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AC034102.8-201ENST00000615146 484 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AC007318.2-201ENST00000620999 243 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AC091953.2-201ENST00000623979 160 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 AC068057.2-201ENST00000624047 895 ntBASIC3.42□□□□□ -1.86
SDF4Q9BRK5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SDF4Q9BRK5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 FTLP6-201ENST00000355274 422 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 RNA5SP139-201ENST00000364340 117 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 SNORA44-201ENST00000384584 132 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 NDUFB4P5-201ENST00000415445 361 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AC019097.1-201ENST00000424783 735 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AL365496.1-201ENST00000426885 215 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AC080014.1-201ENST00000496877 1201 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 ARL4AP2-201ENST00000507378 601 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AC022878.1-201ENST00000530684 149 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AC106782.4-201ENST00000568264 210 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AL136363.1-201ENST00000605349 337 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AL031775.1-201ENST00000607014 887 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 RNU6-87P-201ENST00000607561 108 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 AC007494.3-201ENST00000624660 743 ntBASIC3.41□□□□□ -1.86
SDF4Q9BRK5 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
SDF4Q9BRK5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
SDF4Q9BRK5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.4□□□□□ -1.86
SDF4Q9BRK5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SDF4Q9BRK5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.4□□□□□ -1.87
SDF4Q9BRK5 RNU6-511P-201ENST00000363496 107 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AL139397.2-201ENST00000404529 772 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AL356583.2-201ENST00000426536 280 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.4□□□□□ -1.87
SDF4Q9BRK5 ARPC3P1-201ENST00000437218 533 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 UBE2D3P4-201ENST00000441973 436 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 USP9YP12-201ENST00000450481 570 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.4□□□□□ -1.87
SDF4Q9BRK5 SNORD97-201ENST00000459187 142 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 RBM43P1-201ENST00000476891 1081 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AC006483.1-201ENST00000487308 313 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 FABP5P5-201ENST00000515537 406 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms