Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC138749.5-201ENST00000611461 208 ntBASIC2.76□□□□□ -1.97
SSX3Q99909 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.76□□□□□ -1.97
SSX3Q99909 AC116165.2-201ENST00000616705 206 ntBASIC2.76□□□□□ -1.97
SSX3Q99909 AC006338.1-201ENST00000618453 749 ntBASIC2.76□□□□□ -1.97
SSX3Q99909 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.76□□□□□ -1.97
SSX3Q99909 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSX3Q99909 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSX3Q99909 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSX3Q99909 AL353743.1-202ENST00000431724 1695 ntBASIC2.76□□□□□ -1.97
SSX3Q99909 CR848007.1-201ENST00000442354 1699 ntBASIC2.76□□□□□ -1.97
SSX3Q99909 AC073346.2-201ENST00000624724 2058 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SSX3Q99909 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.75□□□□□ -1.97
SSX3Q99909 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSX3Q99909 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSX3Q99909 OR1S2-201ENST00000302592 978 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 SET-203ENST00000372688 801 ntTSL 2 BASIC2.75□□□□□ -1.97
SSX3Q99909 U3.19-201ENST00000390893 196 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 MRPL42P2-201ENST00000403169 426 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 AL122016.1-201ENST00000403365 367 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 NDUFS5P1-201ENST00000405668 289 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 RN7SKP111-201ENST00000410349 271 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 Y_RNA.598-201ENST00000410480 95 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 RPL19P1-201ENST00000411635 428 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 BX682237.1-201ENST00000415016 335 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 RPS15AP12-201ENST00000419498 388 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 AC019097.1-201ENST00000424783 735 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 AL358075.3-201ENST00000426289 226 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.75□□□□□ -1.97
SSX3Q99909 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.75□□□□□ -1.97
SSX3Q99909 HMGB3P11-201ENST00000440127 604 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 AC093156.1-201ENST00000440382 670 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.75□□□□□ -1.97
SSX3Q99909 RPS15AP34-201ENST00000487776 387 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 RPS29P20-201ENST00000489592 171 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 AC114786.4-201ENST00000508771 728 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.75□□□□□ -1.97
SSX3Q99909 APOOP4-201ENST00000513530 597 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
SSX3Q99909 FABP5P5-201ENST00000515537 406 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 RNA5SP290-201ENST00000517133 127 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 AC107934.2-201ENST00000518653 310 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.75□□□□□ -1.97
SSX3Q99909 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSX3Q99909 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.75□□□□□ -1.97
SSX3Q99909 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSX3Q99909 GLYCAM1-201ENST00000546596 285 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.75□□□□□ -1.97
SSX3Q99909 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.75□□□□□ -1.97
SSX3Q99909 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.75□□□□□ -1.97
SSX3Q99909 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.75□□□□□ -1.97
SSX3Q99909 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.75□□□□□ -1.97
SSX3Q99909 AC090616.3-201ENST00000582184 217 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 MIR548AB-201ENST00000584917 84 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 OR1M4P-201ENST00000589199 287 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 AC136601.2-201ENST00000604356 474 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 AP000860.1-201ENST00000605250 559 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 AC239868.4-201ENST00000608318 671 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.75□□□□□ -1.97
SSX3Q99909 AC107871.2-201ENST00000612894 502 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 AC092140.2-201ENST00000618027 521 ntBASIC2.75□□□□□ -1.97
SSX3Q99909 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.75□□□□□ -1.97
SSX3Q99909 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSX3Q99909 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.75□□□□□ -1.97
SSX3Q99909 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
SSX3Q99909 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSX3Q99909 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SSX3Q99909 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SSX3Q99909 RNU6-884P-201ENST00000363889 107 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 Y_RNA.245-201ENST00000364493 95 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 SNORA26.8-201ENST00000391306 124 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SSX3Q99909 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.74□□□□□ -1.97
SSX3Q99909 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.74□□□□□ -1.97
SSX3Q99909 CYCSP46-201ENST00000423569 204 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.74□□□□□ -1.97
SSX3Q99909 HMGB1P27-201ENST00000431429 603 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.74□□□□□ -1.97
SSX3Q99909 DPPA3P1-201ENST00000448050 469 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.74□□□□□ -1.97
SSX3Q99909 SNORD97-201ENST00000459187 142 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.74□□□□□ -1.97
SSX3Q99909 MRPS17P3-201ENST00000465453 385 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 RBM43P1-201ENST00000476891 1081 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.74□□□□□ -1.97
SSX3Q99909 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.74□□□□□ -1.97
SSX3Q99909 AC118465.1-201ENST00000513820 1271 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 RN7SKP40-201ENST00000517211 242 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 SNORA70.24-201ENST00000517233 118 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.74□□□□□ -1.97
SSX3Q99909 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.74□□□□□ -1.97
SSX3Q99909 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.74□□□□□ -1.97
SSX3Q99909 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.74□□□□□ -1.97
SSX3Q99909 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.74□□□□□ -1.97
SSX3Q99909 MIR4276-201ENST00000584832 70 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 AC121247.2-201ENST00000604776 136 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 RPL23AP88-201ENST00000605759 454 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 AC008498.1-201ENST00000613012 531 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms