Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU6-1193P-201ENST00000459461 107 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 MRPL42P6-201ENST00000486397 371 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 AC104685.1-201ENST00000502445 371 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.75□□□□□ -2.29
COL12A1Q99715 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.75□□□□□ -2.29
COL12A1Q99715 AL163153.1-201ENST00000554223 283 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 RNU6-368P-201ENST00000620928 107 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 RNU6-538P-201ENST00000622329 107 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 AC068620.4-201ENST00000636730 1182 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 RNU6-799P-201ENST00000363567 107 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 RNU6-72P-201ENST00000384285 79 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 RNA5SP266-201ENST00000410273 108 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.75□□□□□ -2.29
COL12A1Q99715 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.75□□□□□ -2.29
COL12A1Q99715 AL035407.2-201ENST00000454090 378 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 SNORD97-201ENST00000459187 142 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 HMGN2P13-201ENST00000476476 274 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 SNORD59.2-201ENST00000516873 68 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.75□□□□□ -2.29
COL12A1Q99715 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.75□□□□□ -2.29
COL12A1Q99715 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.75□□□□□ -2.29
COL12A1Q99715 AC087465.1-201ENST00000560574 245 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 AP001180.3-201ENST00000582221 145 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 CFTRP2-201ENST00000634304 199 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.75□□□□□ -2.29
COL12A1Q99715 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC0.75□□□□□ -2.29
COL12A1Q99715 SNORD14B-201ENST00000364533 90 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
COL12A1Q99715 RNU6-418P-201ENST00000384035 107 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.75□□□□□ -2.29
COL12A1Q99715 RNU1-104P-201ENST00000517280 175 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 HMGB1P46-201ENST00000520062 610 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 AL391261.3-201ENST00000557194 520 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 MIR3122-201ENST00000577243 73 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 MIR4458-201ENST00000578872 75 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.75□□□□□ -2.29
COL12A1Q99715 MIR4636-201ENST00000582271 80 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 HMGN1P30-201ENST00000589286 268 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 AC073055.1-201ENST00000456901 1621 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 MIR1468-201ENST00000410600 86 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC0.74□□□□□ -2.29
COL12A1Q99715 AC018437.1-201ENST00000492214 406 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 MTND3P24-201ENST00000506306 329 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 AC008676.3-201ENST00000521237 435 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 AL031601.2-202ENST00000622650 282 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 uc_338.22-201ENST00000622722 187 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
COL12A1Q99715 SNORA9.1-201ENST00000362412 131 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 RNU6-48P-201ENST00000384161 107 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.74□□□□□ -2.29
COL12A1Q99715 snoU13.19-201ENST00000459148 104 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.74□□□□□ -2.29
COL12A1Q99715 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.74□□□□□ -2.29
COL12A1Q99715 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.74□□□□□ -2.29
COL12A1Q99715 AC133485.1-201ENST00000567176 124 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 AC138907.6-201ENST00000568401 126 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 AC005786.1-201ENST00000588553 154 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 MZT1P2-201ENST00000604387 248 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 AC245884.12-201ENST00000615364 59 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 ELL2P3-201ENST00000457883 1602 ntBASIC0.74□□□□□ -2.29
COL12A1Q99715 RNU6-43P-201ENST00000384302 107 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 Z99497.1-201ENST00000421282 135 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 AC060773.1-201ENST00000421698 310 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 AL357134.1-201ENST00000445848 426 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 SNORA48.11-201ENST00000517015 89 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.73□□□□□ -2.29
COL12A1Q99715 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.73□□□□□ -2.29
COL12A1Q99715 MIR4802-201ENST00000581881 80 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 MIR4512-201ENST00000583257 77 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 AC243829.6-201ENST00000612652 106 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.73□□□□□ -2.29
COL12A1Q99715 SNORA67.1-201ENST00000364749 141 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 AL139397.2-201ENST00000404529 772 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 UBE2FP3-201ENST00000436366 524 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 AC010625.1-201ENST00000511296 403 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.73□□□□□ -2.29
COL12A1Q99715 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.73□□□□□ -2.29
COL12A1Q99715 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.73□□□□□ -2.29
COL12A1Q99715 AC123786.2-201ENST00000603459 275 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 AC012557.2-201ENST00000605919 418 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 AC140725.3-201ENST00000616193 880 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 AC009318.3-201ENST00000616916 503 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.73□□□□□ -2.29
COL12A1Q99715 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
COL12A1Q99715 MIR17-201ENST00000385012 84 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 RPS20P15-201ENST00000412792 311 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.73□□□□□ -2.29
COL12A1Q99715 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.73□□□□□ -2.29
COL12A1Q99715 AC012497.1-201ENST00000429392 575 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 AC135999.1-201ENST00000478962 479 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 AC098583.1-201ENST00000480875 255 ntBASIC0.73□□□□□ -2.29
COL12A1Q99715 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.73□□□□□ -2.29
COL12A1Q99715 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.73□□□□□ -2.29
COL12A1Q99715 Y_RNA.170-201ENST00000363746 110 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 Y_RNA.572-201ENST00000384757 98 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 RPL23AP47-201ENST00000408017 460 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 RNU6-955P-201ENST00000410497 104 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 AC092745.2-202ENST00000411880 369 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.72□□□□□ -2.29
COL12A1Q99715 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms