Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 MIR6766-201ENST00000622641 72 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AC010608.3-201ENST00000625048 527 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AC004808.1-201ENST00000627671 721 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.05
CDX2Q99626 ZNF355P-201ENST00000427301 3216 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CDX2Q99626 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CDX2Q99626 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CDX2Q99626 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.27□□□□□ -2.05
CDX2Q99626 RNU6-173P-201ENST00000364215 104 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 RNU6-621P-201ENST00000364752 109 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 RNA5SP190-201ENST00000365222 118 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 Y_RNA.472-201ENST00000384322 102 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.27□□□□□ -2.05
CDX2Q99626 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.27□□□□□ -2.05
CDX2Q99626 RPL26P6-201ENST00000440913 438 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 RAC1P7-201ENST00000445367 377 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 AL358794.1-201ENST00000445689 381 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 FABP5P13-201ENST00000452144 328 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.27□□□□□ -2.05
CDX2Q99626 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.27□□□□□ -2.05
CDX2Q99626 SNORD13-201ENST00000459299 104 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 AC108734.3-201ENST00000481241 1165 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CDX2Q99626 AC023424.2-201ENST00000493479 777 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 AC114981.1-201ENST00000503897 678 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CDX2Q99626 AC096571.1-202ENST00000506634 735 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 AC091163.3-201ENST00000518269 1144 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.27□□□□□ -2.05
CDX2Q99626 AC005832.3-201ENST00000537929 631 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.27□□□□□ -2.05
CDX2Q99626 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.27□□□□□ -2.05
CDX2Q99626 AC110588.1-201ENST00000559699 137 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.27□□□□□ -2.05
CDX2Q99626 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.27□□□□□ -2.05
CDX2Q99626 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.27□□□□□ -2.05
CDX2Q99626 AC015688.2-201ENST00000584523 262 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 MIR4760-201ENST00000585040 80 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 U73023.1-201ENST00000603134 700 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.27□□□□□ -2.05
CDX2Q99626 BX248123.2-201ENST00000606318 124 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 AF129408.1-201ENST00000608767 431 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 AP000254.1-201ENST00000609934 520 ntBASIC2.27□□□□□ -2.05
CDX2Q99626 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.27□□□□□ -2.05
CDX2Q99626 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CDX2Q99626 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.27□□□□□ -2.05
CDX2Q99626 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.26□□□□□ -2.05
CDX2Q99626 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
CDX2Q99626 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CDX2Q99626 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDX2Q99626 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDX2Q99626 SNORA1.3-201ENST00000384676 136 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 RNU2-43P-201ENST00000410306 190 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AL449283.1-202ENST00000418249 604 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.26□□□□□ -2.05
CDX2Q99626 USP9YP11-201ENST00000427537 717 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AC009238.1-201ENST00000442165 424 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 RNF2P1-201ENST00000442955 1010 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.26□□□□□ -2.05
CDX2Q99626 AC009237.6-201ENST00000446969 424 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.26□□□□□ -2.05
CDX2Q99626 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 MTATP6P14-201ENST00000455189 673 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AC008837.2-201ENST00000513076 418 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AC022483.1-201ENST00000514020 567 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.26□□□□□ -2.05
CDX2Q99626 AC110760.3-202ENST00000515177 371 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 RNU6-583P-201ENST00000516012 92 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 RN7SKP40-201ENST00000517211 242 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AP001372.4-201ENST00000524889 472 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.26□□□□□ -2.05
CDX2Q99626 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.26□□□□□ -2.05
CDX2Q99626 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.26□□□□□ -2.05
CDX2Q99626 AC105224.1-201ENST00000587055 421 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 BNIP3P40-201ENST00000596017 556 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 HSPE1P7-201ENST00000604681 321 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AL390208.1-201ENST00000605885 644 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AC097504.2-201ENST00000608088 454 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AC243773.3-201ENST00000613270 256 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AL445264.1-201ENST00000621719 171 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 AC099654.8-201ENST00000637757 681 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 LINC02211-204ENST00000642024 1070 ntBASIC2.26□□□□□ -2.05
CDX2Q99626 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.26□□□□□ -2.05
CDX2Q99626 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CDX2Q99626 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDX2Q99626 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CDX2Q99626 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.25□□□□□ -2.05
CDX2Q99626 AC010680.1-201ENST00000590024 3590 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDX2Q99626 MIR122-201ENST00000385044 85 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 MIR613-201ENST00000385248 95 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 RPS3AP24-201ENST00000407896 734 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 MIR1276-201ENST00000408707 83 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 TPMTP2-201ENST00000414372 726 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 AC024082.2-201ENST00000434771 238 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 NANOGP2-201ENST00000435391 727 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 AP000852.1-201ENST00000472460 573 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 SETP11-201ENST00000473027 690 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms