Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 SAR1AP2-201ENST00000392696 594 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 RNU2-68P-201ENST00000410878 191 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 RN7SKP58-201ENST00000411010 305 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AL109913.1-201ENST00000421173 514 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 RPL36AP53-201ENST00000432891 316 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC002486.1-201ENST00000435098 391 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 HSPD1P21-201ENST00000436541 245 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 SNRPEP9-201ENST00000436794 238 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 MTCYBP1-201ENST00000454315 1119 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC010099.1-201ENST00000455434 375 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC034236.1-201ENST00000469891 373 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 RN7SL594P-201ENST00000470590 287 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC107401.1-201ENST00000503426 685 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC108078.1-201ENST00000508073 725 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC091133.4-201ENST00000511142 308 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 Y_RNA.689-201ENST00000516589 107 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 RN7SKP282-201ENST00000516824 299 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AP001646.1-201ENST00000527936 915 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC078899.3-201ENST00000599065 212 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC078795.2-201ENST00000602835 1252 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC004805.2-201ENST00000605382 482 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 RNU4-89P-201ENST00000607443 133 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC022893.3-201ENST00000607665 437 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC007684.1-201ENST00000609671 477 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 MIR7641-1-201ENST00000627518 61 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 MTND5P26-201ENST00000426018 1752 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 RLIMP1-201ENST00000339626 1680 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 MTND5P17-201ENST00000418405 1603 ntBASIC3.29□□□□□ -1.88
NR1H4Q96RI1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 FTLP6-201ENST00000355274 422 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 Y_RNA.367-201ENST00000365544 101 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 MIR301A-201ENST00000385261 86 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 RNA5SP252-201ENST00000391131 119 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AL139397.2-201ENST00000404529 772 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 RNA5SP344-201ENST00000411081 104 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 BMS1P22-201ENST00000414726 313 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC114491.1-201ENST00000416095 246 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AL807761.1-201ENST00000417622 171 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AL589823.1-201ENST00000429577 183 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 MTATP6P16-201ENST00000434543 526 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 CECR9-201ENST00000453421 199 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AL031183.1-201ENST00000457667 207 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 RN7SL75P-201ENST00000461926 281 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC010618.1-201ENST00000469924 477 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 RNA5SP217-201ENST00000515959 91 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 RNA5SP165-201ENST00000517142 115 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 SNORA31.26-201ENST00000517250 137 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC022695.1-201ENST00000522089 237 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AL133393.1-201ENST00000603277 287 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 MIR6748-201ENST00000610433 71 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 FTX_3.1-201ENST00000610451 147 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC130324.3-201ENST00000614165 542 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AL161629.2-201ENST00000615347 275 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC025034.2-201ENST00000623264 286 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AC112484.5-201ENST00000624189 228 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AL512643.1-201ENST00000635735 524 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 OR5AK4P-201ENST00000635912 903 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 AP000553.6-201ENST00000641242 118 ntBASIC3.28□□□□□ -1.88
NR1H4Q96RI1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NR1H4Q96RI1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AC017071.1-201ENST00000564407 2204 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 U8.9-201ENST00000365667 134 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 RNU6-198P-201ENST00000384258 104 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms