Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MTND1P37-201ENST00000636562 264 ntBASIC2.24□□□□□ -2.05
COL21A1Q96P44 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL21A1Q96P44 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
COL21A1Q96P44 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.23□□□□□ -2.05
COL21A1Q96P44 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.23□□□□□ -2.05
COL21A1Q96P44 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL21A1Q96P44 SNORD114-30-201ENST00000364448 72 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 MIR504-201ENST00000385065 83 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 RPS4XP7-201ENST00000406274 780 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 TXNP7-201ENST00000406296 293 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 RPS3AP37-201ENST00000419176 745 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.23□□□□□ -2.05
COL21A1Q96P44 SRIP2-201ENST00000428470 166 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 NANOGP2-201ENST00000435391 727 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 MTCYBP3-201ENST00000445588 1137 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 MTND1P31-201ENST00000449206 961 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC092155.2-201ENST00000454675 477 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC108729.1-201ENST00000487812 947 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC034222.1-201ENST00000494052 532 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.23□□□□□ -2.05
COL21A1Q96P44 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.23□□□□□ -2.05
COL21A1Q96P44 SNORA19.3-201ENST00000516165 130 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 RN7SKP40-201ENST00000517211 242 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 RNU1-104P-201ENST00000517280 175 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.23□□□□□ -2.05
COL21A1Q96P44 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.23□□□□□ -2.05
COL21A1Q96P44 OR4R1P-201ENST00000529879 463 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.23□□□□□ -2.05
COL21A1Q96P44 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC027176.1-201ENST00000560204 514 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
COL21A1Q96P44 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC006270.3-201ENST00000605967 1036 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC067747.1-201ENST00000608026 250 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC243829.7-201ENST00000633081 225 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 AC009902.3-201ENST00000606235 2172 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 AL137003.2-201ENST00000606924 2538 ntBASIC2.23□□□□□ -2.05
COL21A1Q96P44 CCT4P2-201ENST00000233836 1548 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 SNORA68.1-201ENST00000364537 132 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 RNU6-744P-201ENST00000365557 107 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 RNU6-432P-201ENST00000384196 109 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 RNU6-1316P-201ENST00000384242 108 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 Y_RNA.465-201ENST00000384293 102 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 RNU6-114P-201ENST00000384704 105 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 MIR144-201ENST00000384886 86 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AL109755.1-201ENST00000401791 649 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AL513475.1-201ENST00000406602 315 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AL355143.1-201ENST00000407101 841 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 Z82209.1-201ENST00000422141 2135 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC092427.1-202ENST00000430569 476 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 RPL21P134-201ENST00000453468 483 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC013267.1-201ENST00000458227 267 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 snoU109.3-201ENST00000459477 145 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 MEMO1P3-201ENST00000459811 302 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 LARP1BP2-201ENST00000486594 519 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 RPL36AP51-201ENST00000487216 318 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 Y_RNA.676-201ENST00000516393 96 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 RNA5SP24-201ENST00000516478 95 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC078814.3-201ENST00000553036 491 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC121758.2-201ENST00000553271 193 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AL391261.3-201ENST00000557194 520 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC087465.1-201ENST00000560574 245 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC010546.1-201ENST00000569391 485 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AP001269.3-201ENST00000588718 329 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC002545.1-201ENST00000592511 181 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.22□□□□□ -2.05
COL21A1Q96P44 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL21A1Q96P44 SDR42E1P2-201ENST00000614861 481 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC025034.2-201ENST00000623264 286 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 MIR1291-201ENST00000627649 87 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC007336.1-201ENST00000576365 3828 ntBASIC2.22□□□□□ -2.05
COL21A1Q96P44 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL21A1Q96P44 AC016717.2-201ENST00000609089 5141 ntBASIC2.21□□□□□ -2.05
COL21A1Q96P44 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
COL21A1Q96P44 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
COL21A1Q96P44 MIRLET7G-201ENST00000362280 84 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 SNORA67.1-201ENST00000364749 141 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 RN7SKP226-201ENST00000364912 300 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms