Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RNU6-1271P-201ENST00000517049 105 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AC105129.1-201ENST00000560250 297 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 OR1M4P-201ENST00000589199 287 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AC234771.5-201ENST00000600161 514 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 HMGN2P28-201ENST00000606102 262 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 uc_338.18-201ENST00000615451 175 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AP000346.3-201ENST00000622821 210 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AC006065.5-201ENST00000623427 349 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PTCHD1Q96NR3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
PTCHD1Q96NR3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PTCHD1Q96NR3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 AC005183.1-201ENST00000603687 1979 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 RNA5SP52-201ENST00000362448 134 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 RNU6-99P-201ENST00000364721 107 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 Y_RNA.485-201ENST00000384395 102 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 RNU6-1222P-201ENST00000384615 107 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 AL513331.1-201ENST00000411908 397 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 MRPS18CP6-201ENST00000423587 223 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 SCARNA10-201ENST00000459255 330 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 AC008571.1-201ENST00000467232 300 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 AC009643.1-201ENST00000532030 391 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 SUB1P3-201ENST00000564581 315 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 LINC00901.1-201ENST00000617252 152 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 AL606534.2-204ENST00000635008 178 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 DHX9P1-201ENST00000436565 3076 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 AC087190.4-201ENST00000574616 8334 ntBASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD1Q96NR3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 UBE2L2-201ENST00000254302 429 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AC021146.4-201ENST00000309229 279 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 Y_RNA.39-201ENST00000362620 98 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 RNU5A-1-201ENST00000362698 116 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 RNU6-450P-201ENST00000364654 107 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AL445529.1-201ENST00000398713 389 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 RPS15AP6-201ENST00000420703 385 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 MTCO1P39-201ENST00000426148 480 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AC079780.1-201ENST00000428259 207 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AL592045.1-201ENST00000429867 352 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AL158071.1-201ENST00000430315 461 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AL133396.1-201ENST00000432048 687 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 RPL9P32-201ENST00000464118 620 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 SUMO2P6-201ENST00000505273 288 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AC009812.2-201ENST00000517657 457 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AP001781.1-201ENST00000530977 207 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 MYL12BP1-201ENST00000569826 507 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AC209154.1-201ENST00000582156 337 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 RNF138P2-201ENST00000603490 592 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AL160281.1-201ENST00000605307 311 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 SNORD58B-201ENST00000607313 66 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 MIR6748-201ENST00000610433 71 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 AL512643.1-201ENST00000635735 524 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 Z99571.1-201ENST00000636677 394 ntBASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCHD1Q96NR3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms