Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC43Q96MW1 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC43Q96MW1 MRPL50P4-201ENST00000446432 475 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 CECR9-201ENST00000453421 199 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 OR6K1P-201ENST00000456766 971 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC43Q96MW1 RNU7-59P-201ENST00000459101 61 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 AC126182.1-201ENST00000478134 357 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 RN7SL432P-201ENST00000484057 298 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 AC055855.1-201ENST00000489563 579 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 AC105252.1-201ENST00000503089 286 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 RNU6-927P-201ENST00000516199 100 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 AP004247.1-201ENST00000531556 1289 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC43Q96MW1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC43Q96MW1 AC093012.1-202ENST00000549403 582 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC43Q96MW1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC43Q96MW1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC43Q96MW1 AL450336.1-201ENST00000605180 586 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 BCRP9-201ENST00000605312 388 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 AC004805.2-201ENST00000605382 482 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC43Q96MW1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC43Q96MW1 AC103798.2-201ENST00000624292 632 ntBASIC2.98□□□□□ -1.93
CCDC43Q96MW1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC43Q96MW1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC43Q96MW1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC43Q96MW1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 RNU6-931P-201ENST00000363850 107 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 Y_RNA.245-201ENST00000364493 95 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 SNORA68.1-201ENST00000364537 132 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 RNU2-49P-201ENST00000410666 184 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 RNU2-52P-201ENST00000410680 190 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 RNA5SP492-201ENST00000411330 114 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 RPL19P1-201ENST00000411635 428 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 RPL7P10-201ENST00000417407 739 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 AL035407.1-201ENST00000429211 571 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 AC112220.1-201ENST00000434628 355 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 RPS15AP5-201ENST00000436276 388 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 SNRPEP9-201ENST00000436794 238 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 RPS15AP7-201ENST00000439294 405 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 HSPE1P23-201ENST00000509838 286 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 AC078899.3-201ENST00000599065 212 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 AC068790.3-201ENST00000602988 553 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 AL607023.1-201ENST00000620045 248 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 AL136313.1-201ENST00000624804 202 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC43Q96MW1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 PABPC1P9-201ENST00000426076 1612 ntBASIC2.97□□□□□ -1.93
CCDC43Q96MW1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.96□□□□□ -1.93
CCDC43Q96MW1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CCDC43Q96MW1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC43Q96MW1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC43Q96MW1 AC062016.1-201ENST00000355719 319 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 SNORD62.1-201ENST00000362541 86 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC43Q96MW1 BX682237.1-201ENST00000415016 335 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC43Q96MW1 NUP35P1-201ENST00000422734 947 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC43Q96MW1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC43Q96MW1 ELOCP14-201ENST00000428070 331 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 AC092427.1-202ENST00000430569 476 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 ELOCP7-201ENST00000439968 331 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC43Q96MW1 AC013267.1-201ENST00000458227 267 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 AC008571.1-201ENST00000467232 300 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
CCDC43Q96MW1 AC090525.1-201ENST00000479116 478 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 RPS15AP34-201ENST00000487776 387 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC43Q96MW1 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC43Q96MW1 RNU6-311P-201ENST00000516224 102 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 RNU5A-4P-201ENST00000516588 111 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 RN7SKP40-201ENST00000517211 242 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 AP000907.2-201ENST00000530827 353 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 SNHG22-203ENST00000617833 660 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 MIR7515-201ENST00000637837 67 ntBASIC2.96□□□□□ -1.94
CCDC43Q96MW1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms