Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 U8.18-201ENST00000459285 133 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AC002456.2-201ENST00000509356 380 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 SEPT14P4-201ENST00000513445 186 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 RNA5SP401-201ENST00000515920 127 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 FO082796.1-201ENST00000523795 183 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AP001804.3-201ENST00000525146 880 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 CKAP2P1-201ENST00000555477 2049 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AL355836.1-201ENST00000555951 870 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 DPPA3P3-201ENST00000603842 430 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AC006077.1-201ENST00000604746 343 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AL390240.1-201ENST00000612950 384 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AC244205.2-202ENST00000635781 342 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 RNU6-946P-201ENST00000383878 107 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 SNORA24.1-201ENST00000384401 135 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 EI24P2-201ENST00000397776 1076 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 RNU6ATAC-201ENST00000408749 126 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 RN7SKP285-201ENST00000410137 318 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 RPL17P36-201ENST00000420302 549 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 AC245054.1-201ENST00000420944 258 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 AC006989.1-201ENST00000427212 131 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 HMGB1P31-201ENST00000437242 427 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 NOTCH2P1-201ENST00000443481 624 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 RPS3AP46-201ENST00000448352 682 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 CACYBPP2-201ENST00000453625 678 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 AC007991.1-201ENST00000522680 631 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 OR5BN1P-201ENST00000532955 829 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 AC024619.4-201ENST00000580924 316 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 MIR4775-201ENST00000581168 75 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 AC025034.2-201ENST00000623264 286 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 U6.114-201ENST00000636407 96 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 AC006020.1-201ENST00000420179 1854 ntBASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.07□□□□□ -1.76
CDK5RAP3Q96JB5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AC002546.1-201ENST00000588041 2504 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 MFSD8-236ENST00000641509 4050 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 Y_RNA.390-201ENST00000383932 102 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 RN7SKP140-201ENST00000411196 284 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 ZNF90P2-204ENST00000419323 1075 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AL035423.1-201ENST00000420331 213 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 MTCYBP8-201ENST00000422855 651 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 UBE2D3P2-201ENST00000424409 445 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AL445584.1-201ENST00000431451 330 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AC020550.1-201ENST00000447385 163 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AL163973.1-201ENST00000484753 577 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AC108078.2-201ENST00000510750 236 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AC105417.1-201ENST00000514691 285 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AP006587.4-201ENST00000526053 529 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 OR5B19P-201ENST00000531766 928 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AL020991.1-201ENST00000612314 373 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 U7.8-201ENST00000619968 63 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AC007998.5-201ENST00000622938 237 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 MIR3662-201ENST00000637030 95 ntBASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.06□□□□□ -1.76
CDK5RAP3Q96JB5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 AC007656.2-201ENST00000624902 4547 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms