Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 TRMT112P2-201ENST00000512910 132 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 SNORA3.4-201ENST00000515969 96 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 RNU6-311P-201ENST00000516224 102 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 RNA5SP82-201ENST00000516707 92 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 MRPS36P3-201ENST00000519284 130 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 DNAJC19P9-201ENST00000555084 351 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AC093424.1-201ENST00000604999 338 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AC112220.3-201ENST00000605502 502 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 FO624990.1-201ENST00000636373 85 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AP002907.1-201ENST00000606361 1430 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 MTND4P1-201ENST00000457501 1466 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 RNU6-115P-201ENST00000364310 107 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 RNU6-413P-201ENST00000384115 107 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AL121972.1-201ENST00000402023 252 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 FGF7P8-201ENST00000402994 292 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 RPL22P18-201ENST00000417197 377 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC004022.1-201ENST00000447766 1066 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 RPL18AP17-201ENST00000455326 198 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 BX322784.1-201ENST00000455793 1077 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC011979.1-201ENST00000472300 483 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC116353.3-201ENST00000511215 249 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AL391813.2-201ENST00000609113 322 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 MTND4P34-201ENST00000572715 1371 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 MTCO1P23-201ENST00000415223 1526 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 RN7SKP226-201ENST00000364912 300 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AL592310.1-201ENST00000414330 671 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 RPS24P7-201ENST00000416921 246 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 MTCO2P21-201ENST00000419780 677 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC010099.3-201ENST00000423896 409 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 MTND2P20-201ENST00000440805 661 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 SYPL1P1-201ENST00000473622 768 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 MTCO3P35-201ENST00000485582 781 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC009094.1-201ENST00000564443 426 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 MIR3199-1-201ENST00000582434 88 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 APOOP1-201ENST00000604695 592 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC069304.2-201ENST00000605154 435 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC055876.5-201ENST00000605667 259 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC090425.2-201ENST00000608818 501 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC097478.2-201ENST00000610572 514 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 AC011330.2-201ENST00000621680 635 ntBASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.01□□□□□ -2.09
SHROOM3Q8TF72 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SHROOM3Q8TF72 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SHROOM3Q8TF72 RNU4-92P-201ENST00000363783 136 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 RNU6-629P-201ENST00000384061 103 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 RNU6-1200P-201ENST00000384162 107 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 MIR506-201ENST00000384998 124 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 MIR513B-201ENST00000385136 84 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 TAS2R15P-201ENST00000390674 928 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 SSXP10-201ENST00000402595 565 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 RNU6-712P-201ENST00000410558 100 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 EI24P1-201ENST00000416584 867 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 AL606517.1-201ENST00000446914 387 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 ARPC3P2-201ENST00000457786 533 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 MEMO1P3-201ENST00000459811 302 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 MTND2P14-201ENST00000482139 351 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 AIG1P1-201ENST00000503376 148 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 AC093281.2-201ENST00000510153 597 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 RNU6-1225P-201ENST00000516336 65 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 IGKV2D-36-201ENST00000518643 226 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 OR5AK1P-201ENST00000524837 922 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms