Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC087272.1-201ENST00000523624 533 ntBASIC0.82□□□□□ -2.28
ALMS1Q8TCU4 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.82□□□□□ -2.28
ALMS1Q8TCU4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 U8.14-201ENST00000390843 143 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 RPL7P30-201ENST00000420888 709 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 CBX3P2-202ENST00000583365 535 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 AL627230.6-201ENST00000611129 280 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 AC006338.1-201ENST00000618453 749 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 MIR4529-201ENST00000578110 78 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 AC073413.2-201ENST00000604332 360 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 AC083806.3-201ENST00000614016 455 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 MIR4496-201ENST00000635896 61 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 AC009812.4-201ENST00000569134 1805 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 AC016769.3-201ENST00000396562 315 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 AL356432.1-201ENST00000405809 419 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 AC092745.2-202ENST00000411880 369 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 RNU1-98P-201ENST00000458992 160 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 AC110792.2-201ENST00000510278 224 ntBASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
ALMS1Q8TCU4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 RNU4-91P-201ENST00000364778 135 ntBASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 MIR1250-201ENST00000408098 113 ntBASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 FAM206BP-201ENST00000510179 541 ntBASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 AC233266.2-201ENST00000567067 528 ntBASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 CYCSP48-201ENST00000417124 323 ntBASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 AL583843.1-201ENST00000456070 346 ntBASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 AL109918.3-201ENST00000603072 338 ntBASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 AC025594.3-201ENST00000613068 790 ntBASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 AC008669.1-201ENST00000565823 2178 ntBASIC0.8□□□□□ -2.28
ALMS1Q8TCU4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AL445305.1-201ENST00000432577 575 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AL353689.1-201ENST00000438895 199 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AC055731.1-201ENST00000474387 401 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AC093281.2-201ENST00000510153 597 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 TEX21P-201ENST00000447107 1476 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 SNORA3A-201ENST00000364113 130 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 RNA5SP354-201ENST00000391247 136 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 RNU1-78P-201ENST00000391248 165 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 HMGN1P14-201ENST00000412459 517 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AL590233.1-201ENST00000430017 456 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 OSTCP8-201ENST00000445117 448 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AC109454.4-201ENST00000623411 649 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AC008133.2-201ENST00000624540 351 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 RNA5SP257-201ENST00000363023 116 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AC023790.1-201ENST00000482174 347 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 MIR4295-201ENST00000585286 85 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 AC123912.5-201ENST00000605470 343 ntBASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
ALMS1Q8TCU4 MIR216A-201ENST00000385063 110 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 RPS4XP3-201ENST00000398541 413 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 AC090525.3-201ENST00000605601 189 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 AC097468.3-201ENST00000607956 456 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 AL356118.1-201ENST00000635272 1078 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 RNU1-62P-201ENST00000362599 164 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 Z80107.1-201ENST00000436830 412 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 AP000949.1-201ENST00000438328 629 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 DUXAP5-201ENST00000529668 529 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 AC025918.2-201ENST00000558683 763 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 AC025263.3-201ENST00000622965 1396 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 MIR934-201ENST00000401241 83 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 EZH2P1-201ENST00000431167 291 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 AC079776.3-201ENST00000450665 370 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 AC093801.2-201ENST00000503966 1050 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 NDUFB4P2-201ENST00000509515 391 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 AP003033.1-201ENST00000527244 415 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms