Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 Z96811.1-201ENST00000445880 108 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 RPL37P4-201ENST00000448908 268 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 SSXP1-201ENST00000453640 473 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 snoU13.28-201ENST00000459235 104 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC087588.1-201ENST00000462203 316 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC116337.2-201ENST00000477662 156 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 HSPD1P15-201ENST00000505573 1122 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AP003467.2-201ENST00000520175 319 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 HSPE1P20-201ENST00000538133 289 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 ARL2BPP2-201ENST00000550907 489 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC012414.6-201ENST00000568241 401 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 HMGN1P30-201ENST00000589286 268 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC079089.3-201ENST00000603094 673 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 RNU6-87P-201ENST00000607561 108 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC006338.1-201ENST00000618453 749 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 MIR3651-201ENST00000630427 90 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 FTLP6-201ENST00000355274 422 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 RNA5SP50-201ENST00000363731 107 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 Y_RNA.598-201ENST00000410480 95 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 RPL19P1-201ENST00000411635 428 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 HMGN2P35-201ENST00000412164 270 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC016769.2-201ENST00000414815 475 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC099548.1-201ENST00000421443 426 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 ZNF863P-201ENST00000426746 417 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC010153.1-201ENST00000432862 727 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC005019.1-201ENST00000436455 431 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AL714022.1-201ENST00000439897 151 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC093156.1-201ENST00000440382 670 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 CYCSP35-201ENST00000451978 304 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 SNRPFP4-201ENST00000456366 242 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 RN7SL601P-201ENST00000471221 293 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 RBM43P1-201ENST00000476891 1081 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 RN7SL293P-201ENST00000481765 281 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AL160314.1-201ENST00000490836 438 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 DUXAP2-201ENST00000519198 589 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 MTND2P38-201ENST00000522536 667 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 RPS3AP4-201ENST00000555161 764 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 MIR3922-201ENST00000585192 84 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC009977.1-201ENST00000586015 570 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 Z99497.2-201ENST00000603634 310 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 Z94722.1-201ENST00000604328 474 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC239868.4-201ENST00000608318 671 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC104237.2-201ENST00000612456 443 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AL121772.2-201ENST00000614331 297 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC034102.8-201ENST00000615146 484 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AC073308.1-201ENST00000623696 305 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 AL603839.4-201ENST00000624658 1005 ntBASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC197Q8NCU1 RNU6-140P-201ENST00000384566 108 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 RNU6-14P-201ENST00000384630 106 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 RNY3P9-201ENST00000384727 106 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 RNA5SP492-201ENST00000411330 114 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AC006366.1-201ENST00000422002 759 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 HMGN2P30-201ENST00000423237 256 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 MTND1P28-201ENST00000435623 950 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 UBBP3-201ENST00000445497 241 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 SNORD97-201ENST00000459187 142 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AC010486.3-201ENST00000511602 785 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AP006587.4-201ENST00000526053 529 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AC128657.1-201ENST00000549459 145 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms