Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 AL158063.1-201ENST00000615349 536 ntBASIC2.96□□□□□ -1.94
CCDC63Q8NA47 AC018692.3-201ENST00000623929 123 ntBASIC2.96□□□□□ -1.94
CCDC63Q8NA47 AL355596.1-201ENST00000565399 3996 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AC073325.2-201ENST00000339545 159 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 MIR22-201ENST00000362190 85 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 RNU6-270P-201ENST00000364131 105 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 RNU4-91P-201ENST00000364778 135 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 SNORD116-1-201ENST00000384335 95 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 MIR181A2-201ENST00000384863 110 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 HMGN1P14-201ENST00000412459 517 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AC098826.1-201ENST00000433943 471 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AC006028.1-201ENST00000438379 402 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 BNIP3P2-201ENST00000441221 577 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 SSXP1-201ENST00000453640 473 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AP000705.1-201ENST00000454567 350 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AC008155.2-201ENST00000464337 397 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AC093012.1-202ENST00000549403 582 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AMZ2P1-203ENST00000565833 850 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 DPPA3P3-201ENST00000603842 430 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 NUTF2P8-201ENST00000604593 363 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 RPL23AP88-201ENST00000605759 454 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AL451064.1-201ENST00000607718 471 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AC006338.1-201ENST00000618453 749 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 MTND1P37-201ENST00000636562 264 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 OR5H6-203ENST00000642105 978 ntBASIC2.95□□□□□ -1.94
CCDC63Q8NA47 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CCDC63Q8NA47 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AL049641.1-201ENST00000441055 1948 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 RNU1-109P-201ENST00000383960 147 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 SNORA7.4-201ENST00000384249 137 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 RNU2-33P-201ENST00000410344 192 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 RNU2-36P-201ENST00000410361 191 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 RN7SKP142-201ENST00000411236 328 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 SPA17P1-201ENST00000416656 452 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AL353678.1-201ENST00000422735 741 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AL590383.1-201ENST00000428602 75 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AL031667.1-201ENST00000440222 725 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 MTND2P22-201ENST00000444325 1033 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AP000936.2-201ENST00000447151 681 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 RPL23AP20-201ENST00000447965 421 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 SNRPFP4-201ENST00000456366 242 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 RN7SL293P-201ENST00000481765 281 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AC093534.1-201ENST00000504977 132 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AC010587.1-201ENST00000505809 469 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AC117532.1-201ENST00000514638 323 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 TRAV28-201ENST00000557548 323 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 MIR3670-2-201ENST00000582974 65 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 MIR3670-1-201ENST00000584160 65 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 MIR3670-3-201ENST00000584855 65 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 BNIP3P8-201ENST00000597863 560 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AC008277.2-201ENST00000605196 797 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 MIR3670-4-201ENST00000612260 65 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 MIR622-201ENST00000638396 96 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC63Q8NA47 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.94□□□□□ -1.94
CCDC63Q8NA47 MTCO1P12-201ENST00000414273 1543 ntBASIC2.93□□□□□ -1.94
CCDC63Q8NA47 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC63Q8NA47 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC63Q8NA47 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC63Q8NA47 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC63Q8NA47 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CCDC63Q8NA47 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC63Q8NA47 RNU5E-1-201ENST00000362477 120 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms