Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 CR392039.5-201ENST00000623201 510 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC073308.1-201ENST00000623696 305 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC068057.2-201ENST00000624047 895 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 ASNSP3-201ENST00000451989 1306 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AL049641.1-201ENST00000441055 1948 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 SNORA62.3-201ENST00000365110 153 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 RNU5E-5P-201ENST00000365379 116 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 RNU1-138P-201ENST00000384093 164 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AL109755.1-201ENST00000401791 649 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 RPL17P12-201ENST00000413391 526 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 Z85995.1-201ENST00000415547 335 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AC069157.1-201ENST00000421749 137 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 MTCO3P45-201ENST00000443036 613 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 ELOCP30-201ENST00000447108 299 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 PRDX3P3-201ENST00000447765 522 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 RNU6-420P-201ENST00000458780 107 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 SLC25A15P5-201ENST00000508033 253 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 Y_RNA.688-201ENST00000516565 95 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AP002404.1-201ENST00000532005 451 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 HPRT1P3-201ENST00000539521 576 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AC123904.2-201ENST00000548059 300 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 ZNF519P3-201ENST00000557158 1032 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AL356432.3-201ENST00000568952 465 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AC009163.5-201ENST00000575421 637 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 MIR3922-201ENST00000585192 84 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AC006130.2-201ENST00000586202 326 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AL391813.2-201ENST00000609113 322 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AC012360.2-201ENST00000609349 391 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 AC104010.1-201ENST00000616889 150 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 FO624990.1-201ENST00000636373 85 ntBASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC71LQ8N9Z2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 MIR26A1-201ENST00000362205 77 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 RNU6-1035P-201ENST00000384477 107 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 MIR134-201ENST00000385258 73 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 RNU6-278P-201ENST00000390945 109 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AL451054.2-201ENST00000420896 202 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 CYCSP46-201ENST00000423569 204 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AL356583.2-201ENST00000426536 280 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 RPL36AP6-201ENST00000435770 321 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 ARPC3P1-201ENST00000437218 533 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 SDAD1P2-201ENST00000441308 2028 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 MTND2P22-201ENST00000444325 1033 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 USP9YP12-201ENST00000450481 570 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 RPL27AP5-201ENST00000469428 449 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AC117440.1-201ENST00000474107 571 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 RN7SL293P-201ENST00000481765 281 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 RPL9P33-201ENST00000484311 566 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AC112204.1-201ENST00000502591 103 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 RPL37P25-201ENST00000507308 276 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 OR5BM1P-201ENST00000512021 366 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 SAP18P1-201ENST00000512058 390 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AC114797.1-201ENST00000514003 728 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AC012065.4-201ENST00000602445 679 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AC008739.3-201ENST00000603262 127 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AL049779.4-201ENST00000604500 156 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms