Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC087588.1-201ENST00000462203 316 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 RPS29P26-201ENST00000477483 171 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 RAP1BP2-201ENST00000478270 544 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 AC011825.1-201ENST00000484967 388 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 RNU6-390P-201ENST00000516259 103 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 AC068587.4-201ENST00000533893 186 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 AC022080.3-201ENST00000544433 482 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.99□□□□□ -1.93
RTL3Q8N8U3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.99□□□□□ -1.93
RTL3Q8N8U3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.99□□□□□ -1.93
RTL3Q8N8U3 AC010620.2-201ENST00000600135 313 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 AP000403.1-201ENST00000603349 851 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 AC093732.2-201ENST00000607950 274 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 AC004908.2-201ENST00000609090 574 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.99□□□□□ -1.93
RTL3Q8N8U3 AL158063.1-201ENST00000615349 536 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 ZNF519P1-201ENST00000449011 1626 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.99□□□□□ -1.93
RTL3Q8N8U3 AL390237.1-201ENST00000404226 1415 ntBASIC2.99□□□□□ -1.93
RTL3Q8N8U3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RTL3Q8N8U3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RTL3Q8N8U3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.98□□□□□ -1.93
RTL3Q8N8U3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RTL3Q8N8U3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RTL3Q8N8U3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RTL3Q8N8U3 RNU6-217P-201ENST00000384164 104 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AL359704.1-201ENST00000411586 781 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AL513477.1-202ENST00000417061 214 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 CYCSP46-201ENST00000423569 204 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AL365496.1-201ENST00000426885 215 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 MED14P1-201ENST00000430517 648 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AL139132.1-201ENST00000431587 344 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.98□□□□□ -1.93
RTL3Q8N8U3 RSU1P2-202ENST00000437884 485 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AC009969.1-201ENST00000438726 172 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 MTND1P30-201ENST00000441241 901 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 ZNF114P1-201ENST00000453500 292 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AC008481.1-201ENST00000463278 396 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.98□□□□□ -1.93
RTL3Q8N8U3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AC007115.1-201ENST00000546853 234 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.98□□□□□ -1.93
RTL3Q8N8U3 PCMTD1P2-201ENST00000565017 355 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AC012435.1-202ENST00000568772 240 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 MTCYBP33-201ENST00000575007 1130 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AC006504.3-201ENST00000586818 523 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 UBE2L4-201ENST00000587688 464 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AC005498.1-201ENST00000592125 465 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AC011939.3-201ENST00000613686 466 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 UCA1.1-201ENST00000620952 75 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AL158801.5-201ENST00000623123 465 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 AL356266.1-201ENST00000623311 483 ntBASIC2.98□□□□□ -1.93
RTL3Q8N8U3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RTL3Q8N8U3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
RTL3Q8N8U3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 Y_RNA.51-201ENST00000362725 102 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 Y_RNA.97-201ENST00000363094 102 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 RNU6-501P-201ENST00000364072 100 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 RNU4-24P-201ENST00000364565 139 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 Y_RNA.318-201ENST00000365131 97 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 RNU6-140P-201ENST00000384566 108 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 NDUFB4P5-201ENST00000415445 361 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC016907.1-201ENST00000419483 435 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AL365184.2-201ENST00000431139 435 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 EPS15P1-201ENST00000448836 336 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 RPL21P41-201ENST00000459863 264 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC022447.3-201ENST00000506865 495 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 RNA5SP385-201ENST00000515947 110 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC060788.1-201ENST00000521318 469 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC091489.2-201ENST00000566263 604 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC012414.6-201ENST00000568241 401 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC010653.1-201ENST00000571108 881 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC112187.2-201ENST00000604345 283 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC064872.1-201ENST00000604823 1072 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 BCRP9-201ENST00000605312 388 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC005000.2-201ENST00000605468 310 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AL031775.1-201ENST00000607014 887 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC107214.2-201ENST00000608204 634 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC073114.1-201ENST00000612027 490 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms