Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SIX5Q8N196 RNU6-212P-201ENST00000362642 104 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 SNORD14B-201ENST00000364533 90 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 RNU6-1093P-201ENST00000391194 107 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.24□□□□□ -1.57
SIX5Q8N196 MIR298-201ENST00000401212 88 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 AL022722.2-201ENST00000402519 180 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 Y_RNA.623-201ENST00000411128 95 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SIX5Q8N196 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.24□□□□□ -1.57
SIX5Q8N196 AL627311.1-201ENST00000431514 115 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.24□□□□□ -1.57
SIX5Q8N196 MTND2P29-201ENST00000438595 412 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 NDUFB1P2-201ENST00000449477 176 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
SIX5Q8N196 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.24□□□□□ -1.57
SIX5Q8N196 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.24□□□□□ -1.57
SIX5Q8N196 FTH1P9-201ENST00000513251 355 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 Y_RNA.673-201ENST00000516306 88 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 AC109479.2-201ENST00000517842 174 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.24□□□□□ -1.57
SIX5Q8N196 MIR5696-201ENST00000578474 85 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.24□□□□□ -1.57
SIX5Q8N196 AL355877.2-201ENST00000603670 358 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SIX5Q8N196 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.24□□□□□ -1.57
SIX5Q8N196 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.24□□□□□ -1.57
SIX5Q8N196 SAMMSON-226ENST00000642089 1582 ntBASIC5.24□□□□□ -1.57
SIX5Q8N196 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SIX5Q8N196 AC000123.3-201ENST00000624029 4975 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SIX5Q8N196 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.23□□□□□ -1.57
SIX5Q8N196 Y_RNA.117-201ENST00000363294 101 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 RN7SKP227-201ENST00000364445 330 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SIX5Q8N196 MIR10A-201ENST00000385043 110 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 MIR34A-201ENST00000385130 110 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 MIR23A-201ENST00000385245 73 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 MIR1290-201ENST00000408735 78 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 AC007919.1-201ENST00000429380 217 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.23□□□□□ -1.57
SIX5Q8N196 H2AFZP5-201ENST00000446960 382 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 FABP5P15-201ENST00000453566 214 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 SNORD125-201ENST00000459538 96 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 RPL23AP45-201ENST00000476406 468 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 RPL21P13-201ENST00000488305 481 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 AC109329.1-201ENST00000518744 317 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 AC134698.5-201ENST00000519444 336 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.23□□□□□ -1.57
SIX5Q8N196 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.23□□□□□ -1.57
SIX5Q8N196 AC103996.1-201ENST00000555468 102 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.23□□□□□ -1.57
SIX5Q8N196 AL590392.1-201ENST00000604960 446 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 AL161629.2-201ENST00000615347 275 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SIX5Q8N196 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SIX5Q8N196 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
SIX5Q8N196 AC009643.2-201ENST00000603543 1448 ntBASIC5.23□□□□□ -1.57
SIX5Q8N196 AC022893.2-201ENST00000564832 3296 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIX5Q8N196 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIX5Q8N196 Y_RNA.183-201ENST00000363882 113 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIX5Q8N196 RNU6-629P-201ENST00000384061 103 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 RNU6-611P-201ENST00000384276 104 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 MIR124-3-201ENST00000384866 87 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 AC244098.2-201ENST00000422068 99 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 MTND3P9-201ENST00000429526 346 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 MYL8P-204ENST00000431574 518 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 AC138761.5-201ENST00000433967 325 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SIX5Q8N196 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.22□□□□□ -1.57
SIX5Q8N196 LINC01399-202ENST00000458450 244 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 AC010285.1-201ENST00000470580 392 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 RPL30P10-201ENST00000488148 337 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 AC008958.1-201ENST00000511047 682 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 MTND1P19-201ENST00000511780 315 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 RNA5SP291-201ENST00000517222 105 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.22□□□□□ -1.57
SIX5Q8N196 AL590705.4-201ENST00000532209 134 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.22□□□□□ -1.57
SIX5Q8N196 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.22□□□□□ -1.57
SIX5Q8N196 HMGB1P14-201ENST00000557424 591 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 MIR4277-201ENST00000578298 84 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 AL645944.1-201ENST00000603857 493 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 AP002826.1-201ENST00000608835 315 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 AL355810.1-201ENST00000614629 552 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 AL360181.4-201ENST00000621752 134 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.22□□□□□ -1.57
SIX5Q8N196 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIX5Q8N196 Z75746.1-201ENST00000440243 2080 ntBASIC5.22□□□□□ -1.57
SIX5Q8N196 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SIX5Q8N196 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIX5Q8N196 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
SIX5Q8N196 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIX5Q8N196 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.22□□□□□ -1.57
SIX5Q8N196 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.21□□□□□ -1.57
SIX5Q8N196 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.57
SIX5Q8N196 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms