Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 CUL1P1-201ENST00000509510 2425 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AL359273.1-201ENST00000510918 627 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 RPL23AP94-201ENST00000512518 302 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AP002748.2-201ENST00000528671 348 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AP000857.1-201ENST00000532151 543 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AL133153.1-201ENST00000557756 303 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AL356432.3-201ENST00000568952 465 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AC104010.1-201ENST00000616889 150 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AC010149.2-201ENST00000637608 315 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 MIR34A-201ENST00000385130 110 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AL356057.3-201ENST00000402607 340 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 USP9YP13-201ENST00000417797 480 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AL356583.2-201ENST00000426536 280 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AC008850.1-201ENST00000427546 362 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AC112220.1-201ENST00000434628 355 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AC129850.1-201ENST00000436203 508 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 MTND2P4-201ENST00000445034 1004 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 MTND2P24-201ENST00000453434 806 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 SNRPGP9-201ENST00000456025 225 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AL049714.1-201ENST00000466686 347 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 RPL30P14-201ENST00000482744 348 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 RPL23AP41-201ENST00000484754 458 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AF038458.1-201ENST00000588406 262 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AC110760.3-201ENST00000598794 467 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AC010620.1-201ENST00000601088 1102 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 Z94722.1-201ENST00000604328 474 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AL391813.2-201ENST00000609113 322 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AC108747.1-201ENST00000609508 535 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 TUG1_2.1-201ENST00000614234 87 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 MIR6076-201ENST00000617521 113 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AC009159.1-201ENST00000618386 642 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AC025048.6-202ENST00000627667 438 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AC084035.1-201ENST00000634543 607 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 AL138713.1-201ENST00000624026 2130 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 OR4G2P-202ENST00000641004 1759 ntBASIC3.05□□□□□ -1.92
CCDC60Q8IWA6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 MTND4P4-201ENST00000439033 1366 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 RNU6-859P-201ENST00000362728 107 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 U3.4-201ENST00000363352 213 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 CD24P4-201ENST00000382840 243 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 RNA5SP344-201ENST00000411081 104 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 RPL27AP8-201ENST00000424277 446 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AC244035.1-201ENST00000430042 390 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 ARL5AP4-201ENST00000430731 512 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AP000936.2-201ENST00000447151 681 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 RNU7-59P-201ENST00000459101 61 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 RNU6-390P-201ENST00000516259 103 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AC022616.6-201ENST00000520479 119 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AL356057.1-201ENST00000533798 831 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AP005205.1-201ENST00000563503 508 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 ACTR3BP3-201ENST00000565577 979 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AC005951.2-201ENST00000576282 495 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AC239868.4-201ENST00000608318 671 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms