Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RPS3AP12-201ENST00000443616 753 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 RPS15AP27-201ENST00000449183 343 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 AL121877.1-201ENST00000453704 622 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 RPL23AP81-201ENST00000455252 467 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.05□□□□□ -1.6
USP48Q86UV5 RPS26P3-201ENST00000470205 348 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 AC010285.1-201ENST00000470580 392 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.05□□□□□ -1.6
USP48Q86UV5 HSPE1P6-201ENST00000479457 291 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 AC090543.2-201ENST00000483963 348 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 AC004057.1-201ENST00000485827 348 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.05□□□□□ -1.6
USP48Q86UV5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.05□□□□□ -1.6
USP48Q86UV5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.05□□□□□ -1.6
USP48Q86UV5 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.05□□□□□ -1.6
USP48Q86UV5 SNORA31.3-201ENST00000516029 96 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 RNU6-864P-201ENST00000516256 108 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 RNU6-327P-201ENST00000516270 127 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.05□□□□□ -1.6
USP48Q86UV5 OR11H5P-201ENST00000554039 926 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 AL355836.1-201ENST00000555951 870 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.05□□□□□ -1.6
USP48Q86UV5 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.05□□□□□ -1.6
USP48Q86UV5 AC005951.2-201ENST00000576282 495 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 MIR3200-201ENST00000580767 85 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 CTHRC1P1-201ENST00000605383 469 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 MTND5P42-201ENST00000637720 498 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 SDAD1P2-201ENST00000441308 2028 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP48Q86UV5 AL592182.3-201ENST00000642132 3304 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
USP48Q86UV5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP48Q86UV5 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
USP48Q86UV5 RNU5A-1-201ENST00000362698 116 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 Y_RNA.167-201ENST00000363735 109 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 SNORD113-7-201ENST00000363762 77 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 Y_RNA.384-201ENST00000383909 102 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 RNU6-14P-201ENST00000384630 106 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.04□□□□□ -1.6
USP48Q86UV5 AL353748.1-201ENST00000440753 474 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
USP48Q86UV5 Y_RNA.632-201ENST00000459189 102 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 RNU7-66P-201ENST00000459469 62 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 AF213884.1-201ENST00000488102 463 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 MTCO1P29-201ENST00000496868 288 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.04□□□□□ -1.6
USP48Q86UV5 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.04□□□□□ -1.6
USP48Q86UV5 AP001804.3-201ENST00000525146 880 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.04□□□□□ -1.6
USP48Q86UV5 AC120057.2-201ENST00000571520 271 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.04□□□□□ -1.6
USP48Q86UV5 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.04□□□□□ -1.6
USP48Q86UV5 AC009570.1-201ENST00000609599 745 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 AL354798.1-201ENST00000622505 329 ntBASIC5.04□□□□□ -1.6
USP48Q86UV5 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP48Q86UV5 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
USP48Q86UV5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.04□□□□□ -1.6
USP48Q86UV5 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
USP48Q86UV5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
USP48Q86UV5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.03□□□□□ -1.6
USP48Q86UV5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.03□□□□□ -1.6
USP48Q86UV5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
USP48Q86UV5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
USP48Q86UV5 ZNF962P-201ENST00000443465 3140 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USP48Q86UV5 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
USP48Q86UV5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP48Q86UV5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP48Q86UV5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USP48Q86UV5 CISD1P1-201ENST00000393907 327 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
USP48Q86UV5 LAP3P1-201ENST00000403648 294 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.03□□□□□ -1.6
USP48Q86UV5 AC092809.3-201ENST00000415453 231 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 EI24P1-201ENST00000416584 867 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 AL591704.1-201ENST00000432574 275 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 NOTCH2P1-201ENST00000443481 624 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 S100A11P1-201ENST00000477525 312 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 AC108860.1-201ENST00000484521 383 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.03□□□□□ -1.6
USP48Q86UV5 RNU6-189P-201ENST00000516120 101 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 RNU6-1045P-201ENST00000516321 107 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.03□□□□□ -1.6
USP48Q86UV5 AL352979.3-201ENST00000553515 247 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 AL121821.2-201ENST00000556081 394 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.03□□□□□ -1.6
USP48Q86UV5 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USP48Q86UV5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.03□□□□□ -1.6
USP48Q86UV5 AC012603.1-201ENST00000606424 528 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 Z82243.1-201ENST00000609432 473 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 AC084757.4-201ENST00000616350 526 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
USP48Q86UV5 AL360181.4-201ENST00000621752 134 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP48Q86UV5 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP48Q86UV5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
USP48Q86UV5 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP48Q86UV5 AC027290.2-201ENST00000623210 18662 ntBASIC5.03□□□□□ -1.6
USP48Q86UV5 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms