Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RPL23AP2-201ENST00000471227 466 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AC090096.1-201ENST00000489168 390 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AC106872.2-201ENST00000494303 480 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 APOOP3-201ENST00000536787 586 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AL360085.1-201ENST00000604713 532 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 Z98200.1-201ENST00000607298 470 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AL138721.1-201ENST00000616756 179 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AC022418.1-201ENST00000624118 445 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AC004925.1-201ENST00000624256 2706 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 RNU6-173P-201ENST00000364215 104 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 RNU6-474P-201ENST00000384243 107 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 RNU1-44P-201ENST00000384453 163 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 RNU6-370P-201ENST00000411008 104 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC004552.1-201ENST00000419089 348 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AL117339.2-201ENST00000430475 180 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AL591212.2-201ENST00000433923 257 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 RPL32P28-201ENST00000443577 397 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 PRDX3P3-201ENST00000447765 522 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 RPS26P3-201ENST00000470205 348 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC090543.2-201ENST00000483963 348 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC004057.1-201ENST00000485827 348 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC110792.1-201ENST00000491826 472 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC008526.1-201ENST00000509149 338 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC008489.1-201ENST00000524271 483 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 ELOCP31-201ENST00000540463 467 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC010201.1-201ENST00000605051 540 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AL355802.3-201ENST00000607571 545 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC022893.3-201ENST00000607665 437 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC133104.2-201ENST00000615272 193 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC098657.3-201ENST00000620434 263 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AC007546.2-201ENST00000623996 360 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 ZNF519P1-201ENST00000449011 1626 ntBASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RUFY4Q6ZNE9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 RNA5SP130-201ENST00000364431 114 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 RNU6-738P-201ENST00000384531 106 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 PPIAP31-201ENST00000405422 495 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AL160275.3-201ENST00000423876 471 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 SKA2P1-201ENST00000425592 390 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AL353748.1-201ENST00000440753 474 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 HMGB3P22-202ENST00000451823 572 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AC020593.1-201ENST00000507399 299 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 RNU6-927P-201ENST00000516199 100 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AL355836.1-201ENST00000555951 870 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 MIR5692C1-201ENST00000585309 91 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AL670379.10-201ENST00000604330 253 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AL670379.9-201ENST00000605428 253 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 FAM27D1-201ENST00000612308 341 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 FAM157A-202ENST00000615155 405 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms