Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNY3P11-201ENST00000364153 102 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 RNU6-76P-201ENST00000384060 104 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 RNU1-82P-201ENST00000390851 165 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 RNU6-882P-201ENST00000391025 103 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 MIR937-201ENST00000401271 86 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AL356968.1-201ENST00000416622 474 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 CEACAMP6-201ENST00000452007 574 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 RPL23AP31-201ENST00000456160 467 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AC011005.2-201ENST00000487324 359 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 RPL17P19-201ENST00000489069 552 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AC022447.4-201ENST00000504053 364 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 Y_RNA.715-201ENST00000517082 110 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 BNIP3P5-201ENST00000562290 498 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 OR1M4P-201ENST00000589199 287 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AL160281.1-201ENST00000605307 311 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AC005344.1-201ENST00000613391 459 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 SNORD39.4-201ENST00000620099 78 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AC138627.2-201ENST00000624202 601 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 MIR4272-201ENST00000635924 64 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 OR14L1P-202ENST00000641545 3009 ntBASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AC107027.3-201ENST00000565095 3473 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 Y_RNA.288-201ENST00000364854 92 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 AC063979.1-201ENST00000415539 377 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 ARL5AP4-201ENST00000430731 512 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 HLA-N-201ENST00000437516 135 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 AC016831.4-201ENST00000438302 307 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 AC011753.3-201ENST00000443436 406 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 RPL23AP2-201ENST00000471227 466 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 SCARNA22-201ENST00000503991 125 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 OR7H2P-201ENST00000513483 306 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 RNU6-408P-201ENST00000515910 100 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 SNORD116-26-201ENST00000516006 96 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 MIR5188-201ENST00000583467 113 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 MIR548AC-201ENST00000585049 88 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 HMGB1P50-201ENST00000605814 607 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 ZFRP1-201ENST00000457579 2970 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 MTND5P7-201ENST00000413558 1798 ntBASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF111Q6ZNA4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 Y_RNA.461-201ENST00000384263 103 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 MIR153-1-201ENST00000384914 90 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AL590762.2-201ENST00000395798 571 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 RPL21P1-201ENST00000399532 476 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 LAP3P1-201ENST00000403648 294 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 RNU6-1156P-201ENST00000410365 100 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AL030996.1-201ENST00000411430 235 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 RPS15AP6-201ENST00000420703 385 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AC006946.1-201ENST00000429106 328 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AL049745.1-201ENST00000433953 286 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AC005154.2-201ENST00000438110 379 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AL353748.1-201ENST00000440753 474 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 RPL29P29-201ENST00000448725 423 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 SUMO1P2-201ENST00000452524 304 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms