Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
NIPAL3Q6P499 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
NIPAL3Q6P499 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NIPAL3Q6P499 RNU6-1284P-201ENST00000363701 100 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 MIR483-201ENST00000385070 76 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 HMGB1P27-201ENST00000431429 603 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 FCF1P1-201ENST00000432690 571 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 RPL21P2-201ENST00000440049 481 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.55□□□□□ -2
NIPAL3Q6P499 NIPA2P5-201ENST00000452282 464 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 S100A11P2-201ENST00000467589 312 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 RPS15AP34-201ENST00000487776 387 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.55□□□□□ -2
NIPAL3Q6P499 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.55□□□□□ -2
NIPAL3Q6P499 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
NIPAL3Q6P499 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.55□□□□□ -2
NIPAL3Q6P499 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NIPAL3Q6P499 AP001004.1-201ENST00000582468 324 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 MIR4307-201ENST00000582802 84 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 MIR3605-201ENST00000583214 100 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 MIR4293-201ENST00000584305 78 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 OR1M4P-201ENST00000589199 287 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 AL451007.1-201ENST00000595491 289 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 AC098826.3-201ENST00000603823 466 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 AC107214.2-201ENST00000608204 634 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 AL161734.1-201ENST00000609720 557 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 AC245517.5-201ENST00000611529 162 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 AC013562.2-201ENST00000611632 603 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.55□□□□□ -2
NIPAL3Q6P499 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.55□□□□□ -2
NIPAL3Q6P499 AC034102.8-201ENST00000615146 484 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.55□□□□□ -2
NIPAL3Q6P499 AC021755.4-201ENST00000616620 456 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 AL161431.1-201ENST00000618966 4205 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 AC007490.1-201ENST00000624321 703 ntBASIC2.55□□□□□ -2
NIPAL3Q6P499 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NIPAL3Q6P499 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.54□□□□□ -2
NIPAL3Q6P499 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.54□□□□□ -2
NIPAL3Q6P499 SNORA68.1-201ENST00000364537 132 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 RNU4-28P-201ENST00000364739 141 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
NIPAL3Q6P499 SET-203ENST00000372688 801 ntTSL 2 BASIC2.54□□□□□ -2
NIPAL3Q6P499 SNORA44-201ENST00000384584 132 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 U8.14-201ENST00000390843 143 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 RNU2-68P-201ENST00000410878 191 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 RNA5SP492-201ENST00000411330 114 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.54□□□□□ -2
NIPAL3Q6P499 AC078974.1-201ENST00000411597 223 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AC023141.4-201ENST00000412031 328 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 NDUFS5P4-201ENST00000412983 318 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 BX682237.1-201ENST00000415016 335 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.54□□□□□ -2
NIPAL3Q6P499 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.54□□□□□ -2
NIPAL3Q6P499 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.54□□□□□ -2
NIPAL3Q6P499 AC092427.1-202ENST00000430569 476 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 GPM6BP2-201ENST00000432046 144 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.54□□□□□ -2
NIPAL3Q6P499 RPS15AP7-201ENST00000439294 405 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AC093156.1-201ENST00000440382 670 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.54□□□□□ -2
NIPAL3Q6P499 GPM6BP1-201ENST00000446387 144 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 MRPL50P4-201ENST00000446432 475 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 DPPA3P1-201ENST00000448050 469 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.54□□□□□ -2
NIPAL3Q6P499 RPS29P26-201ENST00000477483 171 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AC103975.1-201ENST00000482506 483 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.54□□□□□ -2
NIPAL3Q6P499 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 RNU6-415P-201ENST00000516252 97 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 RNA5SP165-201ENST00000517142 115 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 RN7SKP40-201ENST00000517211 242 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.54□□□□□ -2
NIPAL3Q6P499 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.54□□□□□ -2
NIPAL3Q6P499 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.54□□□□□ -2
NIPAL3Q6P499 COX6CP5-201ENST00000527162 228 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NIPAL3Q6P499 ELOCP31-201ENST00000540463 467 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.54□□□□□ -2
NIPAL3Q6P499 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.54□□□□□ -2
NIPAL3Q6P499 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.54□□□□□ -2
NIPAL3Q6P499 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.54□□□□□ -2
NIPAL3Q6P499 AP000811.1-201ENST00000603803 651 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AL161798.1-201ENST00000604630 131 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AC093732.2-201ENST00000607950 274 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AC005046.1-201ENST00000608515 625 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AP000240.1-201ENST00000609910 452 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.54□□□□□ -2
NIPAL3Q6P499 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NIPAL3Q6P499 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.54□□□□□ -2
NIPAL3Q6P499 AC096644.4-201ENST00000563417 2912 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 AC092593.1-201ENST00000515413 1815 ntBASIC2.54□□□□□ -2
NIPAL3Q6P499 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.53□□□□□ -2
NIPAL3Q6P499 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NIPAL3Q6P499 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.53□□□□□ -2
NIPAL3Q6P499 AL391994.1-201ENST00000254724 282 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
NIPAL3Q6P499 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.53□□□□□ -2
NIPAL3Q6P499 UBA52P6-201ENST00000399822 382 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 AL512633.1-201ENST00000399931 655 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms