Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MIR5047-201ENST00000579212 100 ntBASIC3.06□□□□□ -1.92
LYSMD4Q5XG99 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.06□□□□□ -1.92
LYSMD4Q5XG99 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.06□□□□□ -1.92
LYSMD4Q5XG99 AL359999.1-201ENST00000604513 294 ntBASIC3.06□□□□□ -1.92
LYSMD4Q5XG99 AC008498.1-201ENST00000613012 531 ntBASIC3.06□□□□□ -1.92
LYSMD4Q5XG99 AC004696.1-201ENST00000614345 607 ntBASIC3.06□□□□□ -1.92
LYSMD4Q5XG99 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.06□□□□□ -1.92
LYSMD4Q5XG99 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LYSMD4Q5XG99 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LYSMD4Q5XG99 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LYSMD4Q5XG99 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 RNU4-91P-201ENST00000364778 135 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 SNORD67-201ENST00000390833 111 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 RNU6-1197P-201ENST00000391183 107 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 SNORA48.8-201ENST00000391324 134 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 RNA5SP38-201ENST00000410750 119 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 RPS3AP3-201ENST00000411933 242 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 RPL21P24-201ENST00000413752 448 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 NDUFB4P7-201ENST00000423198 363 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC092573.2-201ENST00000434546 243 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 TIMM9P1-201ENST00000436122 256 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 NDUFB4P6-201ENST00000436819 366 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC093156.1-201ENST00000440382 670 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AL033528.1-201ENST00000453780 140 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 SNORD42A-201ENST00000459584 64 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 RPS29P26-201ENST00000477483 171 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 SNORA31.1-201ENST00000515993 133 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 SNORA31.5-201ENST00000516190 133 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 RNU2-46P-201ENST00000517038 113 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 DEFB108A-201ENST00000530110 222 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC123904.3-201ENST00000547218 814 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AL355836.1-201ENST00000555951 870 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 RPL23AP84-201ENST00000571193 464 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 MIR4738-201ENST00000579134 87 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 MIR3146-201ENST00000580367 79 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 MIR3118-1-201ENST00000581787 76 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC121334.2-201ENST00000605387 271 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AL451064.1-201ENST00000607718 471 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC103710.1-201ENST00000610003 901 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC245517.5-201ENST00000611529 162 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 Z99129.1-201ENST00000612510 255 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC013476.2-201ENST00000614456 459 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC090132.2-201ENST00000615881 347 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 AL136313.1-201ENST00000624804 202 ntBASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LYSMD4Q5XG99 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 AL136360.1-201ENST00000503377 1900 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 U8.3-201ENST00000363321 132 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 RNY4P16-201ENST00000364768 94 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 RNY4P34-201ENST00000364779 95 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 AL354719.1-201ENST00000406535 843 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 FCF1P10-201ENST00000407590 479 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 RNA5SP107-201ENST00000411358 122 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 MTCO3P41-201ENST00000414801 328 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 SPA17P1-201ENST00000416656 452 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 AL139413.1-201ENST00000421309 217 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 AC005094.1-201ENST00000440420 368 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 AL135938.1-201ENST00000443141 297 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 MTND6P13-201ENST00000443510 523 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 AC244505.5-201ENST00000443639 207 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 GAPDHP17-201ENST00000449858 1001 ntBASIC3.04□□□□□ -1.92
LYSMD4Q5XG99 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms