Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL357559.1-201ENST00000622228 274 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC38Q502W7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC38Q502W7 MTND5P29-201ENST00000458676 1807 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC38Q502W7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC38Q502W7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
CCDC38Q502W7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CCDC38Q502W7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC38Q502W7 RN7SKP226-201ENST00000364912 300 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 Y_RNA.367-201ENST00000365544 101 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 RNU6-190P-201ENST00000384154 102 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 RNU6-140P-201ENST00000384566 108 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 BX679664.1-201ENST00000434429 253 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC38Q502W7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC38Q502W7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC38Q502W7 AL133162.1-201ENST00000463228 453 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC38Q502W7 AC107401.1-201ENST00000503426 685 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 HSPD1P15-201ENST00000505573 1122 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 SAP18P1-201ENST00000512058 390 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 RNU6-928P-201ENST00000516876 104 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 AP001646.1-201ENST00000527936 915 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC38Q502W7 AC245505.1-201ENST00000556398 224 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 Z84480.1-201ENST00000605131 311 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC38Q502W7 OR5AK4P-201ENST00000635912 903 ntBASIC3.68□□□□□ -1.82
CCDC38Q502W7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC38Q502W7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC38Q502W7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC38Q502W7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC38Q502W7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 MTND5P17-201ENST00000418405 1603 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC068647.1-201ENST00000489539 2265 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 RNU6-512P-201ENST00000364438 103 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC38Q502W7 SNORA24.1-201ENST00000384401 135 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 U8.11-201ENST00000384699 133 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 U8.12-201ENST00000384701 133 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 SNORA48.8-201ENST00000391324 134 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 U3.39-201ENST00000408569 239 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 AL109913.1-201ENST00000421173 514 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 ISCA1P1-201ENST00000426679 387 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 AL591212.2-201ENST00000433923 257 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC38Q502W7 RPS24P13-201ENST00000442520 397 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC38Q502W7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC093899.1-201ENST00000457984 376 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 U8.18-201ENST00000459285 133 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC079382.1-201ENST00000493346 557 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC108078.2-201ENST00000510750 236 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 RNU6-711P-201ENST00000517255 106 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC068657.1-201ENST00000520807 306 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 IGHV3-76-201ENST00000522465 295 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC024619.4-201ENST00000580924 316 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 MIR5187-201ENST00000583479 76 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC006077.1-201ENST00000604746 343 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 AL359740.1-201ENST00000624340 592 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC38Q502W7 AC119674.1-207ENST00000641355 633 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 AL359693.1-201ENST00000614959 2407 ntBASIC3.67□□□□□ -1.82
CCDC38Q502W7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC38Q502W7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CCDC38Q502W7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC38Q502W7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC38Q502W7 FTLP6-201ENST00000355274 422 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 RNU6-179P-201ENST00000363350 107 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 RNU6-270P-201ENST00000364131 105 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC38Q502W7 MIR1-2-201ENST00000384961 85 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC38Q502W7 RNA5SP31-201ENST00000411144 127 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 CYCSP19-201ENST00000411715 316 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC38Q502W7 AC245291.1-201ENST00000419501 328 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 SDCBPP3-201ENST00000419629 891 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC38Q502W7 AL451062.2-201ENST00000427515 271 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 RPL23AP82-202ENST00000427528 469 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 GPM6BP2-201ENST00000432046 144 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms