Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RNU6-741P-201ENST00000383889 107 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 SNORA1.3-201ENST00000384676 136 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 MIR128-1-201ENST00000384921 82 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CDK3Q00526 SNORA48.2-201ENST00000390926 124 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 SNORA48.5-201ENST00000391143 135 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDK3Q00526 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDK3Q00526 RNA5SP31-201ENST00000411144 127 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 Z85995.1-201ENST00000415547 335 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 RPL31P35-201ENST00000431058 377 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 AL512844.2-201ENST00000433990 593 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 SETP5-201ENST00000437270 562 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 AC006539.3-201ENST00000454258 129 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 RPL27AP5-201ENST00000469428 449 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 RPL30P14-201ENST00000482744 348 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 RNU7-51P-201ENST00000516560 62 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 RN7SKP258-201ENST00000517151 304 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 IGKV2-23-201ENST00000518729 323 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 AC022616.3-201ENST00000523940 148 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.11□□□□□ -1.91
CDK3Q00526 AC109347.2-201ENST00000610220 349 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CDK3Q00526 AC099506.2-201ENST00000623074 221 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 AC073476.4-201ENST00000628409 72 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 OR5H6-203ENST00000642105 978 ntBASIC3.11□□□□□ -1.91
CDK3Q00526 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.11□□□□□ -1.91
CDK3Q00526 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDK3Q00526 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDK3Q00526 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.11□□□□□ -1.91
CDK3Q00526 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDK3Q00526 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.1□□□□□ -1.91
CDK3Q00526 OR5J1P-201ENST00000313544 939 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 RNU4-24P-201ENST00000364565 139 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 RNU5E-6P-201ENST00000365574 115 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CDK3Q00526 RNU6-1119P-201ENST00000384349 108 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDK3Q00526 BTF3L4P3-201ENST00000418879 476 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.1□□□□□ -1.91
CDK3Q00526 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.1□□□□□ -1.91
CDK3Q00526 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.1□□□□□ -1.91
CDK3Q00526 AC093106.2-201ENST00000428212 385 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.1□□□□□ -1.91
CDK3Q00526 NEK4P1-201ENST00000433383 879 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 PIGFP3-201ENST00000441918 722 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AL136380.1-201ENST00000447970 162 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.1□□□□□ -1.91
CDK3Q00526 AL590664.1-201ENST00000448065 339 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 RPS20P22-201ENST00000473700 357 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 RN7SL432P-201ENST00000484057 298 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.1□□□□□ -1.91
CDK3Q00526 AC006445.2-201ENST00000510061 472 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.1□□□□□ -1.91
CDK3Q00526 MTND3P5-201ENST00000512798 333 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 RNA5SP341-201ENST00000516261 117 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 RNU6-1220P-201ENST00000517126 108 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.1□□□□□ -1.91
CDK3Q00526 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.1□□□□□ -1.91
CDK3Q00526 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.1□□□□□ -1.91
CDK3Q00526 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.1□□□□□ -1.91
CDK3Q00526 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.1□□□□□ -1.91
CDK3Q00526 MIR4474-201ENST00000579189 78 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 MIR3167-201ENST00000579623 85 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AL670379.6-201ENST00000603753 252 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AL670379.11-201ENST00000604059 253 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AC008162.1-201ENST00000604718 254 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AL670379.1-201ENST00000604752 252 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AL670379.5-201ENST00000605253 252 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AL670379.12-201ENST00000605291 253 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AL670379.8-201ENST00000605353 252 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AL670379.7-201ENST00000605823 252 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 MIR98-201ENST00000606724 119 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AC103591.3-201ENST00000608684 209 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AC072046.2-201ENST00000618366 268 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AL589994.2-201ENST00000621124 579 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AC006111.3-201ENST00000622137 383 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 AC092628.2-201ENST00000622492 339 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 MIR622-201ENST00000638396 96 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 TPTE2P4-201ENST00000258589 1605 ntBASIC3.1□□□□□ -1.91
CDK3Q00526 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDK3Q00526 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDK3Q00526 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDK3Q00526 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDK3Q00526 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDK3Q00526 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDK3Q00526 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDK3Q00526 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDK3Q00526 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.09□□□□□ -1.91
CDK3Q00526 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDK3Q00526 HSPE1P11-201ENST00000339579 310 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 MIR422A-201ENST00000362286 90 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 Y_RNA.194-201ENST00000363985 102 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDK3Q00526 RNU6-39P-201ENST00000384344 107 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 Z92545.1-201ENST00000411782 234 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.09□□□□□ -1.91
CDK3Q00526 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.09□□□□□ -1.91
CDK3Q00526 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.09□□□□□ -1.91
CDK3Q00526 HMGN2P20-201ENST00000437531 273 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms