Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC007038.2-201ENST00000608095 740 ntBASIC1.25□□□□□ -2.21
UBA52P62987 AC091304.6-201ENST00000619761 202 ntBASIC1.25□□□□□ -2.21
UBA52P62987 AP003399.1-201ENST00000637534 361 ntBASIC1.25□□□□□ -2.21
UBA52P62987 AC010329.5-201ENST00000623497 2174 ntBASIC1.25□□□□□ -2.21
UBA52P62987 AC025263.3-201ENST00000622965 1396 ntBASIC1.24□□□□□ -2.21
UBA52P62987 RNA5SP276-201ENST00000362580 94 ntBASIC1.24□□□□□ -2.21
UBA52P62987 RNU6-339P-201ENST00000384310 107 ntBASIC1.24□□□□□ -2.21
UBA52P62987 VN1R36P-201ENST00000414936 291 ntBASIC1.24□□□□□ -2.21
UBA52P62987 AC093106.2-201ENST00000428212 385 ntBASIC1.24□□□□□ -2.21
UBA52P62987 HSPE1P24-201ENST00000450782 238 ntBASIC1.24□□□□□ -2.21
UBA52P62987 RPS29P23-201ENST00000458635 123 ntBASIC1.24□□□□□ -2.21
UBA52P62987 RPL36AP21-201ENST00000490372 323 ntBASIC1.24□□□□□ -2.21
UBA52P62987 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.24□□□□□ -2.21
UBA52P62987 AC021146.2-201ENST00000504736 556 ntBASIC1.24□□□□□ -2.21
UBA52P62987 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.24□□□□□ -2.21
UBA52P62987 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
UBA52P62987 RNA5SP61-201ENST00000516453 100 ntBASIC1.24□□□□□ -2.21
UBA52P62987 SNORA31.24-201ENST00000517232 57 ntBASIC1.24□□□□□ -2.21
UBA52P62987 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.24□□□□□ -2.21
UBA52P62987 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.24□□□□□ -2.21
UBA52P62987 AC118273.2-201ENST00000532092 465 ntBASIC1.24□□□□□ -2.21
UBA52P62987 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.24□□□□□ -2.21
UBA52P62987 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.24□□□□□ -2.21
UBA52P62987 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.24□□□□□ -2.21
UBA52P62987 AC008269.2-201ENST00000561915 1105 ntBASIC1.24□□□□□ -2.21
UBA52P62987 MIR4421-201ENST00000578133 69 ntBASIC1.24□□□□□ -2.21
UBA52P62987 AL157834.3-201ENST00000615543 103 ntBASIC1.24□□□□□ -2.21
UBA52P62987 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.24□□□□□ -2.21
UBA52P62987 AC233981.2-201ENST00000611524 1614 ntBASIC1.24□□□□□ -2.21
UBA52P62987 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
UBA52P62987 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
UBA52P62987 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
UBA52P62987 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.23□□□□□ -2.21
UBA52P62987 AC027514.1-201ENST00000588561 1603 ntBASIC1.23□□□□□ -2.21
UBA52P62987 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
UBA52P62987 MIR126-201ENST00000362291 85 ntBASIC1.23□□□□□ -2.21
UBA52P62987 MIR1323-201ENST00000408090 73 ntBASIC1.23□□□□□ -2.21
UBA52P62987 MIR1304-201ENST00000408243 91 ntBASIC1.23□□□□□ -2.21
UBA52P62987 MIR1276-201ENST00000408707 83 ntBASIC1.23□□□□□ -2.21
UBA52P62987 TATDN1P1-201ENST00000414123 891 ntBASIC1.23□□□□□ -2.21
UBA52P62987 PAICSP7-201ENST00000419829 962 ntBASIC1.23□□□□□ -2.21
UBA52P62987 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.23□□□□□ -2.21
UBA52P62987 AC099677.1-201ENST00000420575 175 ntBASIC1.23□□□□□ -2.21
UBA52P62987 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.23□□□□□ -2.21
UBA52P62987 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.23□□□□□ -2.21
UBA52P62987 RPS3AP44-201ENST00000425466 790 ntBASIC1.23□□□□□ -2.21
UBA52P62987 GTF2IP20-201ENST00000431663 360 ntBASIC1.23□□□□□ -2.21
UBA52P62987 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.23□□□□□ -2.21
UBA52P62987 USP9YP10-201ENST00000454868 628 ntBASIC1.23□□□□□ -2.21
UBA52P62987 MTND4LP3-201ENST00000468320 276 ntBASIC1.23□□□□□ -2.21
UBA52P62987 RPS15AP36-201ENST00000492022 382 ntBASIC1.23□□□□□ -2.21
UBA52P62987 RNA5SP445-201ENST00000515889 115 ntBASIC1.23□□□□□ -2.21
UBA52P62987 SNORA70.16-201ENST00000516390 95 ntBASIC1.23□□□□□ -2.21
UBA52P62987 RNA5SP490-201ENST00000517141 136 ntBASIC1.23□□□□□ -2.21
UBA52P62987 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.23□□□□□ -2.21
UBA52P62987 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.23□□□□□ -2.21
UBA52P62987 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
UBA52P62987 RMST_6.1-201ENST00000611980 203 ntBASIC1.23□□□□□ -2.21
UBA52P62987 AL773524.1-201ENST00000614065 229 ntBASIC1.23□□□□□ -2.21
UBA52P62987 AL353748.2-201ENST00000622148 471 ntBASIC1.23□□□□□ -2.21
UBA52P62987 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
UBA52P62987 AL356473.1-201ENST00000406203 1408 ntBASIC1.23□□□□□ -2.21
UBA52P62987 AC111188.2-201ENST00000529697 1387 ntBASIC1.22□□□□□ -2.21
UBA52P62987 AL033519.2-201ENST00000403958 392 ntBASIC1.22□□□□□ -2.21
UBA52P62987 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.22□□□□□ -2.21
UBA52P62987 AL158823.1-201ENST00000418441 478 ntBASIC1.22□□□□□ -2.21
UBA52P62987 AL445669.1-201ENST00000426743 755 ntBASIC1.22□□□□□ -2.21
UBA52P62987 FO393414.1-201ENST00000428697 1184 ntBASIC1.22□□□□□ -2.21
UBA52P62987 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.22□□□□□ -2.21
UBA52P62987 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.22□□□□□ -2.21
UBA52P62987 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.22□□□□□ -2.21
UBA52P62987 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.22□□□□□ -2.21
UBA52P62987 AMD1P1-201ENST00000457220 922 ntBASIC1.22□□□□□ -2.21
UBA52P62987 TPT1P8-201ENST00000510120 555 ntBASIC1.22□□□□□ -2.21
UBA52P62987 AC008494.2-201ENST00000514544 370 ntBASIC1.22□□□□□ -2.21
UBA52P62987 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.22□□□□□ -2.21
UBA52P62987 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.22□□□□□ -2.21
UBA52P62987 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.22□□□□□ -2.21
UBA52P62987 MIR6504-201ENST00000613520 61 ntBASIC1.22□□□□□ -2.21
UBA52P62987 AP003400.5-201ENST00000624827 617 ntBASIC1.22□□□□□ -2.21
UBA52P62987 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
UBA52P62987 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.22□□□□□ -2.21
UBA52P62987 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
UBA52P62987 RNU6-989P-201ENST00000362756 107 ntBASIC1.21□□□□□ -2.22
UBA52P62987 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
UBA52P62987 SNRPEP2-201ENST00000397592 279 ntBASIC1.21□□□□□ -2.22
UBA52P62987 MIR934-201ENST00000401241 83 ntBASIC1.21□□□□□ -2.22
UBA52P62987 MTATP6P31-201ENST00000406985 692 ntBASIC1.21□□□□□ -2.22
UBA52P62987 RNU6-1328P-201ENST00000410938 106 ntBASIC1.21□□□□□ -2.22
UBA52P62987 RNA5SP450-201ENST00000411206 102 ntBASIC1.21□□□□□ -2.22
UBA52P62987 SDAD1P3-201ENST00000427380 333 ntBASIC1.21□□□□□ -2.22
UBA52P62987 NDUFA5P10-201ENST00000432147 357 ntBASIC1.21□□□□□ -2.22
UBA52P62987 AC015922.2-201ENST00000435593 184 ntBASIC1.21□□□□□ -2.22
UBA52P62987 AL121601.2-201ENST00000438019 707 ntBASIC1.21□□□□□ -2.22
UBA52P62987 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.21□□□□□ -2.22
UBA52P62987 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
UBA52P62987 AC118469.1-201ENST00000442943 488 ntBASIC1.21□□□□□ -2.22
UBA52P62987 BUD31P2-201ENST00000449374 300 ntBASIC1.21□□□□□ -2.22
UBA52P62987 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.21□□□□□ -2.22
UBA52P62987 snoU13.18-201ENST00000459483 104 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms