Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.26□□□□□ -2.21
CKS1BP61024 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
CKS1BP61024 RNA5SP425-201ENST00000410336 112 ntBASIC1.25□□□□□ -2.21
CKS1BP61024 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.25□□□□□ -2.21
CKS1BP61024 AC118469.1-201ENST00000442943 488 ntBASIC1.25□□□□□ -2.21
CKS1BP61024 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.25□□□□□ -2.21
CKS1BP61024 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.25□□□□□ -2.21
CKS1BP61024 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.25□□□□□ -2.21
CKS1BP61024 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.25□□□□□ -2.21
CKS1BP61024 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.25□□□□□ -2.21
CKS1BP61024 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.25□□□□□ -2.21
CKS1BP61024 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.25□□□□□ -2.21
CKS1BP61024 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.25□□□□□ -2.21
CKS1BP61024 AL359212.1-201ENST00000556608 614 ntBASIC1.25□□□□□ -2.21
CKS1BP61024 AC074050.1-201ENST00000563247 211 ntBASIC1.25□□□□□ -2.21
CKS1BP61024 AC106782.4-201ENST00000568264 210 ntBASIC1.25□□□□□ -2.21
CKS1BP61024 MIR1273D-201ENST00000577266 86 ntBASIC1.25□□□□□ -2.21
CKS1BP61024 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.25□□□□□ -2.21
CKS1BP61024 AC016925.2-201ENST00000605108 242 ntBASIC1.25□□□□□ -2.21
CKS1BP61024 uc_338.5-201ENST00000611839 155 ntBASIC1.25□□□□□ -2.21
CKS1BP61024 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.25□□□□□ -2.21
CKS1BP61024 AL356292.1-201ENST00000283110 373 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.24□□□□□ -2.21
CKS1BP61024 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CKS1BP61024 RNU6-338P-201ENST00000383888 105 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 SNORA51.6-201ENST00000384151 125 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.24□□□□□ -2.21
CKS1BP61024 BPY2DP-201ENST00000422208 265 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 MTCO3P46-201ENST00000425787 232 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.24□□□□□ -2.21
CKS1BP61024 AL445646.1-201ENST00000431784 216 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.24□□□□□ -2.21
CKS1BP61024 AC096638.1-201ENST00000444678 216 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.24□□□□□ -2.21
CKS1BP61024 RPS29P23-201ENST00000458635 123 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.24□□□□□ -2.21
CKS1BP61024 MTAPP1-201ENST00000489154 819 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 AC114801.2-201ENST00000503825 781 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.24□□□□□ -2.21
CKS1BP61024 SNORA44.1-201ENST00000517031 108 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.24□□□□□ -2.21
CKS1BP61024 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.24□□□□□ -2.21
CKS1BP61024 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.24□□□□□ -2.21
CKS1BP61024 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 AC084033.1-201ENST00000550830 633 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 AC009268.1-201ENST00000561352 1203 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 OR4K8P-201ENST00000578842 1048 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 RPP40P2-201ENST00000603596 712 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 DUXAP10-204ENST00000612052 616 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 AC022202.1-201ENST00000613515 211 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 AC009233.1-201ENST00000616477 371 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 AL162233.1-201ENST00000620014 944 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 AC091953.2-201ENST00000623979 160 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 Z99571.1-201ENST00000636677 394 ntBASIC1.24□□□□□ -2.21
CKS1BP61024 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CKS1BP61024 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CKS1BP61024 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CKS1BP61024 RNA5SP240-201ENST00000365355 128 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 RNU6-140P-201ENST00000384566 108 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 SNORA64-201ENST00000384674 134 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 AL357078.2-201ENST00000416486 427 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.23□□□□□ -2.21
CKS1BP61024 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.23□□□□□ -2.21
CKS1BP61024 DPH3P2-201ENST00000422618 250 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.23□□□□□ -2.21
CKS1BP61024 SDAD1P3-201ENST00000427380 333 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 FABP5P14-201ENST00000437273 393 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 AC098831.1-201ENST00000440661 216 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
CKS1BP61024 RNA5SP112-201ENST00000515937 99 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 SNORA31.22-201ENST00000517204 135 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 RNA5SP291-201ENST00000517222 105 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.23□□□□□ -2.21
CKS1BP61024 ARL2BPP5-201ENST00000523141 481 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.23□□□□□ -2.21
CKS1BP61024 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.23□□□□□ -2.21
CKS1BP61024 AL160236.1-201ENST00000556317 195 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 MIR4419B-201ENST00000577260 68 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.23□□□□□ -2.21
CKS1BP61024 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.23□□□□□ -2.21
CKS1BP61024 AC068790.3-201ENST00000602988 553 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 AC068313.1-201ENST00000604028 1008 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.23□□□□□ -2.21
CKS1BP61024 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.23□□□□□ -2.21
CKS1BP61024 AC103710.1-201ENST00000610003 901 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 uc_338.14-201ENST00000613162 166 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 AC092192.1-201ENST00000633154 1018 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 IGHVIII-44-202ENST00000636235 289 ntBASIC1.23□□□□□ -2.21
CKS1BP61024 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
CKS1BP61024 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.22□□□□□ -2.21
CKS1BP61024 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CKS1BP61024 MTND5P10-201ENST00000603719 1809 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 AL359854.1-201ENST00000614203 1594 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 MTCO1P23-201ENST00000415223 1526 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CKS1BP61024 RNU6-251P-201ENST00000363235 104 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 RNU6-884P-201ENST00000363889 107 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms