Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
ACTBP60709 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ACTBP60709 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ACTBP60709 Y_RNA.548-201ENST00000384656 105 ntBASIC1.86□□□□□ -2.11
ACTBP60709 AL512604.1-201ENST00000404812 257 ntBASIC1.86□□□□□ -2.11
ACTBP60709 AL030996.1-201ENST00000411430 235 ntBASIC1.86□□□□□ -2.11
ACTBP60709 UBE2D3P3-201ENST00000426992 425 ntBASIC1.86□□□□□ -2.11
ACTBP60709 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.86□□□□□ -2.11
ACTBP60709 MYL8P-204ENST00000431574 518 ntBASIC1.86□□□□□ -2.11
ACTBP60709 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.86□□□□□ -2.11
ACTBP60709 CBWD4P-201ENST00000445695 655 ntBASIC1.86□□□□□ -2.11
ACTBP60709 RPL23AP7-203ENST00000449021 469 ntBASIC1.86□□□□□ -2.11
ACTBP60709 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.86□□□□□ -2.11
ACTBP60709 TMEM251P1-201ENST00000503717 318 ntBASIC1.86□□□□□ -2.11
ACTBP60709 AC093677.1-201ENST00000514414 678 ntBASIC1.86□□□□□ -2.11
ACTBP60709 OR8K2P-201ENST00000524645 927 ntBASIC1.86□□□□□ -2.11
ACTBP60709 AP001189.2-201ENST00000527320 189 ntBASIC1.86□□□□□ -2.11
ACTBP60709 AC009314.1-201ENST00000603871 304 ntBASIC1.86□□□□□ -2.11
ACTBP60709 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.86□□□□□ -2.11
ACTBP60709 AC087821.2-201ENST00000637086 450 ntBASIC1.86□□□□□ -2.11
ACTBP60709 AC010149.2-201ENST00000637608 315 ntBASIC1.86□□□□□ -2.11
ACTBP60709 Z99496.1-201ENST00000469424 1477 ntBASIC1.86□□□□□ -2.11
ACTBP60709 AP006437.1-201ENST00000641440 3685 ntBASIC1.86□□□□□ -2.11
ACTBP60709 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.85□□□□□ -2.11
ACTBP60709 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
ACTBP60709 U8.14-201ENST00000390843 143 ntBASIC1.85□□□□□ -2.11
ACTBP60709 SNORD65.1-201ENST00000390889 71 ntBASIC1.85□□□□□ -2.11
ACTBP60709 MCTS2P-201ENST00000394552 546 ntBASIC1.85□□□□□ -2.11
ACTBP60709 SNRPEP2-201ENST00000397592 279 ntBASIC1.85□□□□□ -2.11
ACTBP60709 MIR888-201ENST00000401186 77 ntBASIC1.85□□□□□ -2.11
ACTBP60709 DHFRP6-201ENST00000401776 268 ntBASIC1.85□□□□□ -2.11
ACTBP60709 RNU2-49P-201ENST00000410666 184 ntBASIC1.85□□□□□ -2.11
ACTBP60709 AC107081.1-201ENST00000414975 361 ntBASIC1.85□□□□□ -2.11
ACTBP60709 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.85□□□□□ -2.11
ACTBP60709 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.85□□□□□ -2.11
ACTBP60709 AC003685.2-201ENST00000422795 395 ntBASIC1.85□□□□□ -2.11
ACTBP60709 AC093106.2-201ENST00000428212 385 ntBASIC1.85□□□□□ -2.11
ACTBP60709 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.85□□□□□ -2.11
ACTBP60709 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.85□□□□□ -2.11
ACTBP60709 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.85□□□□□ -2.11
ACTBP60709 PMCHL2-203ENST00000457791 237 ntBASIC1.85□□□□□ -2.11
ACTBP60709 AC068781.1-201ENST00000488231 618 ntBASIC1.85□□□□□ -2.11
ACTBP60709 OR4G11P-201ENST00000492842 939 ntBASIC1.85□□□□□ -2.11
ACTBP60709 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.85□□□□□ -2.11
ACTBP60709 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.85□□□□□ -2.11
ACTBP60709 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.85□□□□□ -2.11
ACTBP60709 RNA5SP200-201ENST00000516360 103 ntBASIC1.85□□□□□ -2.11
ACTBP60709 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
ACTBP60709 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.85□□□□□ -2.11
ACTBP60709 OR11H5P-201ENST00000554039 926 ntBASIC1.85□□□□□ -2.11
ACTBP60709 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.85□□□□□ -2.11
ACTBP60709 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.85□□□□□ -2.11
ACTBP60709 DNAJC19P3-201ENST00000594491 331 ntBASIC1.85□□□□□ -2.11
ACTBP60709 AC007938.3-201ENST00000604965 623 ntBASIC1.85□□□□□ -2.11
ACTBP60709 AL118556.2-201ENST00000614375 824 ntBASIC1.85□□□□□ -2.11
ACTBP60709 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
ACTBP60709 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
ACTBP60709 AC002550.2-201ENST00000621246 394 ntBASIC1.85□□□□□ -2.11
ACTBP60709 DUXAP9-208ENST00000622815 614 ntBASIC1.85□□□□□ -2.11
ACTBP60709 AC120349.2-201ENST00000625002 298 ntBASIC1.85□□□□□ -2.11
ACTBP60709 AC005539.1-201ENST00000443768 1479 ntBASIC1.85□□□□□ -2.11
ACTBP60709 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ACTBP60709 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.84□□□□□ -2.11
ACTBP60709 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
ACTBP60709 RNU5E-8P-201ENST00000363502 116 ntBASIC1.84□□□□□ -2.11
ACTBP60709 RNA5SP125-201ENST00000364843 120 ntBASIC1.84□□□□□ -2.11
ACTBP60709 MIR147B-201ENST00000390185 80 ntBASIC1.84□□□□□ -2.11
ACTBP60709 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.84□□□□□ -2.11
ACTBP60709 RNA5SP338-201ENST00000410495 85 ntBASIC1.84□□□□□ -2.11
ACTBP60709 DPRXP1-201ENST00000426312 460 ntBASIC1.84□□□□□ -2.11
ACTBP60709 AC092427.1-201ENST00000439177 601 ntBASIC1.84□□□□□ -2.11
ACTBP60709 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.84□□□□□ -2.11
ACTBP60709 AC093155.1-201ENST00000440164 826 ntBASIC1.84□□□□□ -2.11
ACTBP60709 AC244505.3-201ENST00000454598 187 ntBASIC1.84□□□□□ -2.11
ACTBP60709 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.84□□□□□ -2.11
ACTBP60709 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.84□□□□□ -2.11
ACTBP60709 AC098591.2-201ENST00000510152 315 ntBASIC1.84□□□□□ -2.11
ACTBP60709 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.84□□□□□ -2.11
ACTBP60709 RNU2-44P-201ENST00000516795 194 ntBASIC1.84□□□□□ -2.11
ACTBP60709 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ACTBP60709 AP002770.2-201ENST00000543613 532 ntBASIC1.84□□□□□ -2.11
ACTBP60709 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.84□□□□□ -2.11
ACTBP60709 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.84□□□□□ -2.11
ACTBP60709 AC078880.5-201ENST00000617845 421 ntBASIC1.84□□□□□ -2.11
ACTBP60709 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
ACTBP60709 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
ACTBP60709 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.84□□□□□ -2.12
ACTBP60709 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
ACTBP60709 RNU1-148P-201ENST00000384472 162 ntBASIC1.83□□□□□ -2.12
ACTBP60709 MIR676-201ENST00000390702 67 ntBASIC1.83□□□□□ -2.12
ACTBP60709 AL109755.1-201ENST00000401791 649 ntBASIC1.83□□□□□ -2.12
ACTBP60709 VN1R51P-201ENST00000411675 945 ntBASIC1.83□□□□□ -2.12
ACTBP60709 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.83□□□□□ -2.12
ACTBP60709 AL035407.1-201ENST00000429211 571 ntBASIC1.83□□□□□ -2.12
ACTBP60709 RPL17P35-201ENST00000432217 549 ntBASIC1.83□□□□□ -2.12
ACTBP60709 AC018634.1-201ENST00000437554 401 ntBASIC1.83□□□□□ -2.12
ACTBP60709 SDCBPP1-201ENST00000440192 890 ntBASIC1.83□□□□□ -2.12
ACTBP60709 RPL32P28-201ENST00000443577 397 ntBASIC1.83□□□□□ -2.12
ACTBP60709 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.83□□□□□ -2.12
ACTBP60709 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms