Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RN7SKP24-201ENST00000515888 284 ntBASIC1.89□□□□□ -2.11
CMC4P56277 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.89□□□□□ -2.11
CMC4P56277 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.89□□□□□ -2.11
CMC4P56277 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.89□□□□□ -2.11
CMC4P56277 AC087276.1-201ENST00000529659 480 ntBASIC1.89□□□□□ -2.11
CMC4P56277 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.89□□□□□ -2.11
CMC4P56277 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.89□□□□□ -2.11
CMC4P56277 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.89□□□□□ -2.11
CMC4P56277 BCRP9-201ENST00000605312 388 ntBASIC1.89□□□□□ -2.11
CMC4P56277 RPL23AP88-201ENST00000605759 454 ntBASIC1.89□□□□□ -2.11
CMC4P56277 AP000484.1-201ENST00000620067 1252 ntBASIC1.89□□□□□ -2.11
CMC4P56277 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.89□□□□□ -2.11
CMC4P56277 AC084035.1-201ENST00000634543 607 ntBASIC1.89□□□□□ -2.11
CMC4P56277 U2.21-201ENST00000637295 81 ntBASIC1.89□□□□□ -2.11
CMC4P56277 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CMC4P56277 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CMC4P56277 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CMC4P56277 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CMC4P56277 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CMC4P56277 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CMC4P56277 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CMC4P56277 RNU6-461P-201ENST00000364195 107 ntBASIC1.88□□□□□ -2.11
CMC4P56277 RNU1-109P-201ENST00000383960 147 ntBASIC1.88□□□□□ -2.11
CMC4P56277 RNU6-723P-201ENST00000383973 107 ntBASIC1.88□□□□□ -2.11
CMC4P56277 Y_RNA.510-201ENST00000384511 114 ntBASIC1.88□□□□□ -2.11
CMC4P56277 MIR887-201ENST00000401258 79 ntBASIC1.88□□□□□ -2.11
CMC4P56277 AL122016.1-201ENST00000403365 367 ntBASIC1.88□□□□□ -2.11
CMC4P56277 RNU6-757P-201ENST00000410334 100 ntBASIC1.88□□□□□ -2.11
CMC4P56277 AL592148.1-201ENST00000413568 445 ntBASIC1.88□□□□□ -2.11
CMC4P56277 AC096649.2-201ENST00000416186 393 ntBASIC1.88□□□□□ -2.11
CMC4P56277 ELOCP14-201ENST00000428070 331 ntBASIC1.88□□□□□ -2.11
CMC4P56277 HMGB1P9-201ENST00000429856 646 ntBASIC1.88□□□□□ -2.11
CMC4P56277 AC244035.1-201ENST00000430042 390 ntBASIC1.88□□□□□ -2.11
CMC4P56277 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.88□□□□□ -2.11
CMC4P56277 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.88□□□□□ -2.11
CMC4P56277 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CMC4P56277 SNRPEP9-201ENST00000436794 238 ntBASIC1.88□□□□□ -2.11
CMC4P56277 ELOCP7-201ENST00000439968 331 ntBASIC1.88□□□□□ -2.11
CMC4P56277 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.88□□□□□ -2.11
CMC4P56277 MRPL50P4-201ENST00000446432 475 ntBASIC1.88□□□□□ -2.11
CMC4P56277 AL009048.1-201ENST00000450437 298 ntBASIC1.88□□□□□ -2.11
CMC4P56277 USP9YP25-201ENST00000457708 443 ntBASIC1.88□□□□□ -2.11
CMC4P56277 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CMC4P56277 SCARNA11.3-201ENST00000517276 130 ntBASIC1.88□□□□□ -2.11
CMC4P56277 AC090136.1-201ENST00000520009 240 ntBASIC1.88□□□□□ -2.11
CMC4P56277 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.88□□□□□ -2.11
CMC4P56277 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.88□□□□□ -2.11
CMC4P56277 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.88□□□□□ -2.11
CMC4P56277 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.88□□□□□ -2.11
CMC4P56277 AC093012.1-202ENST00000549403 582 ntBASIC1.88□□□□□ -2.11
CMC4P56277 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.88□□□□□ -2.11
CMC4P56277 DUXAP1-201ENST00000556632 463 ntBASIC1.88□□□□□ -2.11
CMC4P56277 MTND4P33-201ENST00000556706 766 ntBASIC1.88□□□□□ -2.11
CMC4P56277 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.88□□□□□ -2.11
CMC4P56277 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.88□□□□□ -2.11
CMC4P56277 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.88□□□□□ -2.11
CMC4P56277 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.88□□□□□ -2.11
CMC4P56277 AC103810.1-201ENST00000579873 453 ntBASIC1.88□□□□□ -2.11
CMC4P56277 RPL12P50-201ENST00000603116 116 ntBASIC1.88□□□□□ -2.11
CMC4P56277 AL158042.1-201ENST00000605338 460 ntBASIC1.88□□□□□ -2.11
CMC4P56277 AC135507.1-201ENST00000607214 561 ntBASIC1.88□□□□□ -2.11
CMC4P56277 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.88□□□□□ -2.11
CMC4P56277 AC034102.8-201ENST00000615146 484 ntBASIC1.88□□□□□ -2.11
CMC4P56277 MIR6817-201ENST00000615588 66 ntBASIC1.88□□□□□ -2.11
CMC4P56277 SNHG22-203ENST00000617833 660 ntBASIC1.88□□□□□ -2.11
CMC4P56277 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CMC4P56277 AC012150.2-201ENST00000621300 544 ntBASIC1.88□□□□□ -2.11
CMC4P56277 AC025034.2-201ENST00000623264 286 ntBASIC1.88□□□□□ -2.11
CMC4P56277 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.88□□□□□ -2.11
CMC4P56277 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.88□□□□□ -2.11
CMC4P56277 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.88□□□□□ -2.11
CMC4P56277 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CMC4P56277 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CMC4P56277 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CMC4P56277 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CMC4P56277 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.87□□□□□ -2.11
CMC4P56277 AC106754.1-201ENST00000562632 1513 ntBASIC1.87□□□□□ -2.11
CMC4P56277 MTND5P29-201ENST00000458676 1807 ntBASIC1.87□□□□□ -2.11
CMC4P56277 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
CMC4P56277 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CMC4P56277 RNU6-433P-201ENST00000363216 104 ntBASIC1.87□□□□□ -2.11
CMC4P56277 RNU6-884P-201ENST00000363889 107 ntBASIC1.87□□□□□ -2.11
CMC4P56277 RNU6-769P-201ENST00000384407 104 ntBASIC1.87□□□□□ -2.11
CMC4P56277 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CMC4P56277 RNA5SP210-201ENST00000391034 120 ntBASIC1.87□□□□□ -2.11
CMC4P56277 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.87□□□□□ -2.11
CMC4P56277 AL356057.3-201ENST00000402607 340 ntBASIC1.87□□□□□ -2.11
CMC4P56277 AL359634.1-202ENST00000404721 284 ntBASIC1.87□□□□□ -2.11
CMC4P56277 NDUFS5P4-201ENST00000412983 318 ntBASIC1.87□□□□□ -2.11
CMC4P56277 RPL21P24-201ENST00000413752 448 ntBASIC1.87□□□□□ -2.11
CMC4P56277 MTCO2P21-201ENST00000419780 677 ntBASIC1.87□□□□□ -2.11
CMC4P56277 BPY2DP-201ENST00000422208 265 ntBASIC1.87□□□□□ -2.11
CMC4P56277 AL445669.1-201ENST00000426743 755 ntBASIC1.87□□□□□ -2.11
CMC4P56277 AC005094.1-201ENST00000440420 368 ntBASIC1.87□□□□□ -2.11
CMC4P56277 AC098831.1-201ENST00000440661 216 ntBASIC1.87□□□□□ -2.11
CMC4P56277 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.87□□□□□ -2.11
CMC4P56277 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.87□□□□□ -2.11
CMC4P56277 ELOCP30-201ENST00000447108 299 ntBASIC1.87□□□□□ -2.11
CMC4P56277 RPL12P25-201ENST00000455592 494 ntBASIC1.87□□□□□ -2.11
CMC4P56277 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms