Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK1P53667 AC091826.1-201ENST00000514065 313 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK1P53667 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK1P53667 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK1P53667 AC093012.1-202ENST00000549403 582 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 AC005476.1-201ENST00000554427 397 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 ACTR3BP3-201ENST00000565577 979 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.18□□□□□ -1.9
LIMK1P53667 AL359999.1-201ENST00000604513 294 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 AC245517.5-201ENST00000611529 162 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 AC131902.3-201ENST00000611767 581 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK1P53667 AC073476.4-201ENST00000628409 72 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 AL136360.1-201ENST00000503377 1900 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.18□□□□□ -1.9
LIMK1P53667 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LIMK1P53667 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
LIMK1P53667 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LIMK1P53667 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LIMK1P53667 RNU4-82P-201ENST00000362443 140 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 RNA5SP197-201ENST00000363357 119 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 SNORD56.3-201ENST00000363507 71 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 SNORD56.5-201ENST00000364281 72 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
LIMK1P53667 RPL7P25-201ENST00000404151 721 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 AL513477.1-202ENST00000417061 214 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.17□□□□□ -1.9
LIMK1P53667 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.17□□□□□ -1.9
LIMK1P53667 AC007919.1-201ENST00000429380 217 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.17□□□□□ -1.9
LIMK1P53667 TIMM9P1-201ENST00000436122 256 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 ARPC3P1-201ENST00000437218 533 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 AL357552.1-201ENST00000445254 415 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 ELOCP23-201ENST00000452014 332 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 AC010631.1-201ENST00000474150 156 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LIMK1P53667 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.17□□□□□ -1.9
LIMK1P53667 RNU6-201P-201ENST00000517100 61 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 RNU6-64P-201ENST00000517119 105 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 RNA5SP291-201ENST00000517222 105 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 OR5G4P-201ENST00000525251 760 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.17□□□□□ -1.9
LIMK1P53667 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.17□□□□□ -1.9
LIMK1P53667 ZNF519P3-201ENST00000557158 1032 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 MIR5697-201ENST00000578045 78 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 MIR3146-201ENST00000580367 79 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.17□□□□□ -1.9
LIMK1P53667 AC008739.2-201ENST00000597006 317 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.17□□□□□ -1.9
LIMK1P53667 AC090132.2-201ENST00000615881 347 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 Z99129.2-201ENST00000619967 314 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 AC068057.2-201ENST00000624047 895 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 MIR622-201ENST00000638396 96 ntBASIC3.17□□□□□ -1.9
LIMK1P53667 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.17□□□□□ -1.9
LIMK1P53667 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LIMK1P53667 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LIMK1P53667 AC010680.1-201ENST00000590024 3590 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LIMK1P53667 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LIMK1P53667 RNU1-105P-201ENST00000363470 161 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 RNA5SP354-201ENST00000391247 136 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 MRPL42P2-201ENST00000403169 426 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 RNU2-62P-201ENST00000410868 191 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 RNA5SP184-201ENST00000411071 108 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 AC245291.1-201ENST00000419501 328 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.16□□□□□ -1.9
LIMK1P53667 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.16□□□□□ -1.9
LIMK1P53667 AC129850.1-201ENST00000436203 508 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.16□□□□□ -1.9
LIMK1P53667 AL590639.1-201ENST00000456484 337 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.16□□□□□ -1.9
LIMK1P53667 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.16□□□□□ -1.9
LIMK1P53667 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LIMK1P53667 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.16□□□□□ -1.9
LIMK1P53667 TTC39CP1-201ENST00000512513 755 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 RNA5SP385-201ENST00000515947 110 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 SCARNA20.6-201ENST00000517251 106 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.16□□□□□ -1.9
LIMK1P53667 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.16□□□□□ -1.9
LIMK1P53667 AC022616.6-201ENST00000520479 119 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.16□□□□□ -1.9
LIMK1P53667 AC007115.1-201ENST00000546853 234 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 AC128657.1-201ENST00000549459 145 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.16□□□□□ -1.9
LIMK1P53667 AC067852.3-201ENST00000589177 561 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.16□□□□□ -1.9
LIMK1P53667 AC013553.2-201ENST00000604244 589 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.16□□□□□ -1.9
LIMK1P53667 SNHG22-203ENST00000617833 660 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 IGHVIII-44-202ENST00000636235 289 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
LIMK1P53667 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIMK1P53667 AC026241.1-201ENST00000517873 2142 ntBASIC3.16□□□□□ -1.9
LIMK1P53667 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.16□□□□□ -1.9
LIMK1P53667 MTND4P4-201ENST00000439033 1366 ntBASIC3.15□□□□□ -1.9
LIMK1P53667 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LIMK1P53667 AC093010.3-201ENST00000570269 15214 ntBASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms