Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 USP9YP6-201ENST00000413550 854 ntBASIC3.85□□□□□ -1.79
COPAP53621 SDCBPP3-201ENST00000419629 891 ntBASIC3.85□□□□□ -1.79
COPAP53621 AL035423.1-201ENST00000420331 213 ntBASIC3.85□□□□□ -1.79
COPAP53621 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.85□□□□□ -1.79
COPAP53621 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.85□□□□□ -1.79
COPAP53621 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.85□□□□□ -1.79
COPAP53621 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.85□□□□□ -1.79
COPAP53621 SNRPEP4-201ENST00000435815 279 ntBASIC3.85□□□□□ -1.79
COPAP53621 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.85□□□□□ -1.79
COPAP53621 FDX1P2-201ENST00000450769 375 ntBASIC3.85□□□□□ -1.79
COPAP53621 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.85□□□□□ -1.79
COPAP53621 RPS23P3-201ENST00000470993 430 ntBASIC3.85□□□□□ -1.79
COPAP53621 AC083798.1-201ENST00000472671 131 ntBASIC3.85□□□□□ -1.79
COPAP53621 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.85□□□□□ -1.79
COPAP53621 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.85□□□□□ -1.79
COPAP53621 AC055876.1-202ENST00000567053 138 ntBASIC3.85□□□□□ -1.79
COPAP53621 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.85□□□□□ -1.79
COPAP53621 BDH2P1-201ENST00000602288 736 ntBASIC3.85□□□□□ -1.79
COPAP53621 RNU1-30P-201ENST00000606575 163 ntBASIC3.85□□□□□ -1.79
COPAP53621 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.85□□□□□ -1.79
COPAP53621 AC092628.2-201ENST00000622492 339 ntBASIC3.85□□□□□ -1.79
COPAP53621 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.85□□□□□ -1.79
COPAP53621 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.85□□□□□ -1.79
COPAP53621 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.85□□□□□ -1.79
COPAP53621 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.85□□□□□ -1.79
COPAP53621 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
COPAP53621 SDAD1P2-201ENST00000441308 2028 ntBASIC3.85□□□□□ -1.79
COPAP53621 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
COPAP53621 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.85□□□□□ -1.79
COPAP53621 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
COPAP53621 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COPAP53621 OR4G2P-202ENST00000641004 1759 ntBASIC3.84□□□□□ -1.79
COPAP53621 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.84□□□□□ -1.79
COPAP53621 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.84□□□□□ -1.79
COPAP53621 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.84□□□□□ -1.79
COPAP53621 RNU6-534P-201ENST00000364877 106 ntBASIC3.84□□□□□ -1.79
COPAP53621 Y_RNA.381-201ENST00000365666 102 ntBASIC3.84□□□□□ -1.79
COPAP53621 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COPAP53621 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.84□□□□□ -1.79
COPAP53621 AL606489.2-201ENST00000433886 234 ntBASIC3.84□□□□□ -1.79
COPAP53621 MTATP6P16-201ENST00000434543 526 ntBASIC3.84□□□□□ -1.79
COPAP53621 SEPT14P3-201ENST00000439401 183 ntBASIC3.84□□□□□ -1.79
COPAP53621 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.84□□□□□ -1.79
COPAP53621 AL732372.2-207ENST00000445840 183 ntBASIC3.84□□□□□ -1.79
COPAP53621 DDX3P2-201ENST00000446138 111 ntBASIC3.84□□□□□ -1.79
COPAP53621 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.84□□□□□ -1.79
COPAP53621 SEPT14P2-201ENST00000453405 183 ntBASIC3.84□□□□□ -1.79
COPAP53621 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.84□□□□□ -1.79
COPAP53621 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.84□□□□□ -1.79
COPAP53621 RNU6-420P-201ENST00000458780 107 ntBASIC3.84□□□□□ -1.79
COPAP53621 RNU7-63P-201ENST00000459054 62 ntBASIC3.84□□□□□ -1.79
COPAP53621 RPS20P20-201ENST00000460498 340 ntBASIC3.84□□□□□ -1.79
COPAP53621 AC006512.1-201ENST00000468816 291 ntBASIC3.84□□□□□ -1.79
COPAP53621 AC126389.1-201ENST00000477436 290 ntBASIC3.84□□□□□ -1.79
COPAP53621 AC116562.3-201ENST00000506136 177 ntBASIC3.84□□□□□ -1.79
COPAP53621 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.84□□□□□ -1.79
COPAP53621 SEPT14P4-201ENST00000513445 186 ntBASIC3.84□□□□□ -1.79
COPAP53621 FO082796.1-201ENST00000523795 183 ntBASIC3.84□□□□□ -1.79
COPAP53621 AP001646.1-201ENST00000527936 915 ntBASIC3.84□□□□□ -1.79
COPAP53621 AC068587.5-201ENST00000528506 175 ntBASIC3.84□□□□□ -1.79
COPAP53621 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.84□□□□□ -1.79
COPAP53621 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.84□□□□□ -1.79
COPAP53621 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.84□□□□□ -1.79
COPAP53621 NCAPGP2-201ENST00000557911 754 ntBASIC3.84□□□□□ -1.79
COPAP53621 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.84□□□□□ -1.79
COPAP53621 AC034105.3-201ENST00000565294 442 ntBASIC3.84□□□□□ -1.79
COPAP53621 MIR3921-201ENST00000577308 85 ntBASIC3.84□□□□□ -1.79
COPAP53621 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.84□□□□□ -1.79
COPAP53621 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.84□□□□□ -1.79
COPAP53621 NRBF2P5-201ENST00000603087 788 ntBASIC3.84□□□□□ -1.79
COPAP53621 DPPA3P3-201ENST00000603842 430 ntBASIC3.84□□□□□ -1.79
COPAP53621 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.84□□□□□ -1.79
COPAP53621 AL110115.1-201ENST00000614396 364 ntBASIC3.84□□□□□ -1.79
COPAP53621 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
COPAP53621 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.84□□□□□ -1.79
COPAP53621 AL008636.1-201ENST00000625038 1018 ntBASIC3.84□□□□□ -1.79
COPAP53621 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.84□□□□□ -1.79
COPAP53621 AC118273.1-201ENST00000525324 3006 ntBASIC3.84□□□□□ -1.79
COPAP53621 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.84□□□□□ -1.8
COPAP53621 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.84□□□□□ -1.8
COPAP53621 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.8
COPAP53621 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
COPAP53621 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
COPAP53621 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.83□□□□□ -1.8
COPAP53621 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COPAP53621 RNU6-606P-201ENST00000384721 111 ntBASIC3.83□□□□□ -1.8
COPAP53621 MIR514A1-201ENST00000385133 98 ntBASIC3.83□□□□□ -1.8
COPAP53621 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COPAP53621 RN7SKP140-201ENST00000411196 284 ntBASIC3.83□□□□□ -1.8
COPAP53621 RN7SKP53-201ENST00000411337 315 ntBASIC3.83□□□□□ -1.8
COPAP53621 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COPAP53621 RPL30P2-201ENST00000414021 291 ntBASIC3.83□□□□□ -1.8
COPAP53621 ZNF90P2-204ENST00000419323 1075 ntBASIC3.83□□□□□ -1.8
COPAP53621 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COPAP53621 HMGN2P31-201ENST00000432430 273 ntBASIC3.83□□□□□ -1.8
COPAP53621 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.83□□□□□ -1.8
COPAP53621 TXNP1-201ENST00000441872 371 ntBASIC3.83□□□□□ -1.8
COPAP53621 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.83□□□□□ -1.8
COPAP53621 AC020550.1-201ENST00000447385 163 ntBASIC3.83□□□□□ -1.8
COPAP53621 RNU6-261P-201ENST00000459506 102 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms