Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
NUP98P52948 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NUP98P52948 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
NUP98P52948 AL109809.4-201ENST00000603520 2185 ntBASIC1.66□□□□□ -2.14
NUP98P52948 SNORA51.6-201ENST00000384151 125 ntBASIC1.66□□□□□ -2.14
NUP98P52948 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.66□□□□□ -2.14
NUP98P52948 AC092047.1-201ENST00000424997 240 ntBASIC1.66□□□□□ -2.14
NUP98P52948 AL445669.1-201ENST00000426743 755 ntBASIC1.66□□□□□ -2.14
NUP98P52948 AC007560.1-201ENST00000426912 237 ntBASIC1.66□□□□□ -2.14
NUP98P52948 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NUP98P52948 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NUP98P52948 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
NUP98P52948 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.66□□□□□ -2.14
NUP98P52948 NDUFA5P6-201ENST00000542110 379 ntBASIC1.66□□□□□ -2.14
NUP98P52948 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NUP98P52948 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.66□□□□□ -2.14
NUP98P52948 AC012443.1-201ENST00000605605 231 ntBASIC1.66□□□□□ -2.14
NUP98P52948 AC006329.2-201ENST00000611491 394 ntBASIC1.66□□□□□ -2.14
NUP98P52948 MIR6840-201ENST00000611937 71 ntBASIC1.66□□□□□ -2.14
NUP98P52948 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.66□□□□□ -2.14
NUP98P52948 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.66□□□□□ -2.14
NUP98P52948 SDAD1P2-201ENST00000441308 2028 ntBASIC1.65□□□□□ -2.14
NUP98P52948 MTND4P27-201ENST00000450813 1354 ntBASIC1.65□□□□□ -2.14
NUP98P52948 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
NUP98P52948 AL137003.2-201ENST00000606924 2538 ntBASIC1.65□□□□□ -2.15
NUP98P52948 AL354685.2-201ENST00000448218 1447 ntBASIC1.65□□□□□ -2.15
NUP98P52948 RNU6-543P-201ENST00000362576 108 ntBASIC1.65□□□□□ -2.15
NUP98P52948 RNU6-461P-201ENST00000364195 107 ntBASIC1.65□□□□□ -2.15
NUP98P52948 Y_RNA.355-201ENST00000365462 98 ntBASIC1.65□□□□□ -2.15
NUP98P52948 SNORA6-201ENST00000384033 151 ntBASIC1.65□□□□□ -2.15
NUP98P52948 SNORD23.1-201ENST00000408212 104 ntBASIC1.65□□□□□ -2.15
NUP98P52948 AC018630.2-202ENST00000422992 927 ntBASIC1.65□□□□□ -2.15
NUP98P52948 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.65□□□□□ -2.15
NUP98P52948 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.65□□□□□ -2.15
NUP98P52948 HMGB3P3-201ENST00000510526 400 ntBASIC1.65□□□□□ -2.15
NUP98P52948 AP004607.1-201ENST00000524456 203 ntBASIC1.65□□□□□ -2.15
NUP98P52948 AP005435.4-201ENST00000529514 284 ntBASIC1.65□□□□□ -2.15
NUP98P52948 ZNF705CP-201ENST00000530515 889 ntBASIC1.65□□□□□ -2.15
NUP98P52948 MIR3609-201ENST00000582661 80 ntBASIC1.65□□□□□ -2.15
NUP98P52948 AP006248.3-201ENST00000623580 594 ntBASIC1.65□□□□□ -2.15
NUP98P52948 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.65□□□□□ -2.15
NUP98P52948 MIR524-201ENST00000385242 87 ntBASIC1.64□□□□□ -2.15
NUP98P52948 RNU2-47P-201ENST00000410649 186 ntBASIC1.64□□□□□ -2.15
NUP98P52948 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.64□□□□□ -2.15
NUP98P52948 AC092573.2-201ENST00000434546 243 ntBASIC1.64□□□□□ -2.15
NUP98P52948 ARF4P4-201ENST00000439608 520 ntBASIC1.64□□□□□ -2.15
NUP98P52948 AC092155.2-201ENST00000454675 477 ntBASIC1.64□□□□□ -2.15
NUP98P52948 AC078857.1-201ENST00000469870 667 ntBASIC1.64□□□□□ -2.15
NUP98P52948 AF131216.2-201ENST00000512316 564 ntBASIC1.64□□□□□ -2.15
NUP98P52948 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.64□□□□□ -2.15
NUP98P52948 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.64□□□□□ -2.15
NUP98P52948 CR383656.7-201ENST00000548164 174 ntBASIC1.64□□□□□ -2.15
NUP98P52948 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.64□□□□□ -2.15
NUP98P52948 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.64□□□□□ -2.15
NUP98P52948 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.64□□□□□ -2.15
NUP98P52948 OR5H6-203ENST00000642105 978 ntBASIC1.64□□□□□ -2.15
NUP98P52948 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
NUP98P52948 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.63□□□□□ -2.15
NUP98P52948 BEND7P1-201ENST00000422058 457 ntBASIC1.63□□□□□ -2.15
NUP98P52948 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.63□□□□□ -2.15
NUP98P52948 RPL31P41-201ENST00000477967 372 ntBASIC1.63□□□□□ -2.15
NUP98P52948 AC092902.1-201ENST00000486999 259 ntBASIC1.63□□□□□ -2.15
NUP98P52948 AC090096.1-201ENST00000489168 390 ntBASIC1.63□□□□□ -2.15
NUP98P52948 HMGN1P7-201ENST00000491722 313 ntBASIC1.63□□□□□ -2.15
NUP98P52948 EIF4EP3-201ENST00000498782 656 ntBASIC1.63□□□□□ -2.15
NUP98P52948 AC093767.1-201ENST00000504523 156 ntBASIC1.63□□□□□ -2.15
NUP98P52948 AC114322.1-201ENST00000506771 926 ntBASIC1.63□□□□□ -2.15
NUP98P52948 AC006499.2-201ENST00000513470 337 ntBASIC1.63□□□□□ -2.15
NUP98P52948 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.63□□□□□ -2.15
NUP98P52948 AC090821.2-201ENST00000523552 176 ntBASIC1.63□□□□□ -2.15
NUP98P52948 SUB1P1-201ENST00000524415 382 ntBASIC1.63□□□□□ -2.15
NUP98P52948 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.63□□□□□ -2.15
NUP98P52948 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.63□□□□□ -2.15
NUP98P52948 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.63□□□□□ -2.15
NUP98P52948 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.63□□□□□ -2.15
NUP98P52948 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.63□□□□□ -2.15
NUP98P52948 VN1R88P-201ENST00000596787 292 ntBASIC1.63□□□□□ -2.15
NUP98P52948 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.63□□□□□ -2.15
NUP98P52948 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.63□□□□□ -2.15
NUP98P52948 AC004852.3-201ENST00000614131 326 ntBASIC1.63□□□□□ -2.15
NUP98P52948 AC012640.5-201ENST00000623897 319 ntBASIC1.63□□□□□ -2.15
NUP98P52948 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.63□□□□□ -2.15
NUP98P52948 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
NUP98P52948 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.63□□□□□ -2.15
NUP98P52948 SNORD82-201ENST00000365530 70 ntBASIC1.63□□□□□ -2.15
NUP98P52948 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.63□□□□□ -2.15
NUP98P52948 MTND4LP3-201ENST00000468320 276 ntBASIC1.63□□□□□ -2.15
NUP98P52948 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
NUP98P52948 MTCO3P42-201ENST00000509488 518 ntBASIC1.63□□□□□ -2.15
NUP98P52948 MTCO3P39-201ENST00000514812 518 ntBASIC1.63□□□□□ -2.15
NUP98P52948 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.63□□□□□ -2.15
NUP98P52948 AC025594.3-201ENST00000613068 790 ntBASIC1.63□□□□□ -2.15
NUP98P52948 ZNF663P-202ENST00000641770 1131 ntBASIC1.63□□□□□ -2.15
NUP98P52948 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
NUP98P52948 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
NUP98P52948 RNU4-51P-201ENST00000364206 140 ntBASIC1.62□□□□□ -2.15
NUP98P52948 RNU1-52P-201ENST00000384190 164 ntBASIC1.62□□□□□ -2.15
NUP98P52948 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.62□□□□□ -2.15
NUP98P52948 AC007098.1-201ENST00000420122 367 ntBASIC1.62□□□□□ -2.15
NUP98P52948 MORF4L1P7-201ENST00000426038 703 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms