Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC010680.1-201ENST00000590024 3590 ntBASIC2.69□□□□□ -1.98
MSH6P52701 AC026241.1-201ENST00000517873 2142 ntBASIC2.68□□□□□ -1.98
MSH6P52701 AL449283.1-202ENST00000418249 604 ntBASIC2.68□□□□□ -1.98
MSH6P52701 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.68□□□□□ -1.98
MSH6P52701 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.68□□□□□ -1.98
MSH6P52701 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.68□□□□□ -1.98
MSH6P52701 AC005297.2-201ENST00000450430 606 ntBASIC2.68□□□□□ -1.98
MSH6P52701 TRGVB-201ENST00000453257 471 ntBASIC2.68□□□□□ -1.98
MSH6P52701 OFD1P3Y-201ENST00000453312 783 ntBASIC2.68□□□□□ -1.98
MSH6P52701 RPS23P3-201ENST00000470993 430 ntBASIC2.68□□□□□ -1.98
MSH6P52701 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.68□□□□□ -1.98
MSH6P52701 GZMAP1-201ENST00000503054 631 ntBASIC2.68□□□□□ -1.98
MSH6P52701 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.68□□□□□ -1.98
MSH6P52701 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.68□□□□□ -1.98
MSH6P52701 PRELID2P1-201ENST00000552837 301 ntBASIC2.68□□□□□ -1.98
MSH6P52701 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.68□□□□□ -1.98
MSH6P52701 BX248123.2-201ENST00000606318 124 ntBASIC2.68□□□□□ -1.98
MSH6P52701 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
MSH6P52701 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
MSH6P52701 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.67□□□□□ -1.98
MSH6P52701 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.67□□□□□ -1.98
MSH6P52701 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
MSH6P52701 SNORA14A-201ENST00000364773 135 ntBASIC2.67□□□□□ -1.98
MSH6P52701 Y_RNA.540-201ENST00000384638 111 ntBASIC2.67□□□□□ -1.98
MSH6P52701 AC068533.2-201ENST00000411872 306 ntBASIC2.67□□□□□ -1.98
MSH6P52701 USP9YP6-201ENST00000413550 854 ntBASIC2.67□□□□□ -1.98
MSH6P52701 AC027124.2-201ENST00000428249 105 ntBASIC2.67□□□□□ -1.98
MSH6P52701 USP9YP8-201ENST00000441913 500 ntBASIC2.67□□□□□ -1.98
MSH6P52701 AL358794.1-201ENST00000445689 381 ntBASIC2.67□□□□□ -1.98
MSH6P52701 OR6K5P-201ENST00000447050 945 ntBASIC2.67□□□□□ -1.98
MSH6P52701 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MSH6P52701 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.67□□□□□ -1.98
MSH6P52701 TMEM251P1-201ENST00000503717 318 ntBASIC2.67□□□□□ -1.98
MSH6P52701 AC096571.1-202ENST00000506634 735 ntBASIC2.67□□□□□ -1.98
MSH6P52701 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.67□□□□□ -1.98
MSH6P52701 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.67□□□□□ -1.98
MSH6P52701 CR383656.7-201ENST00000548164 174 ntBASIC2.67□□□□□ -1.98
MSH6P52701 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.67□□□□□ -1.98
MSH6P52701 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.67□□□□□ -1.98
MSH6P52701 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.67□□□□□ -1.98
MSH6P52701 VN1R83P-201ENST00000595685 445 ntBASIC2.67□□□□□ -1.98
MSH6P52701 AC106028.5-201ENST00000610332 395 ntBASIC2.67□□□□□ -1.98
MSH6P52701 AC025588.4-201ENST00000615802 908 ntBASIC2.67□□□□□ -1.98
MSH6P52701 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MSH6P52701 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.67□□□□□ -1.98
MSH6P52701 AC084824.4-201ENST00000620106 731 ntBASIC2.67□□□□□ -1.98
MSH6P52701 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.67□□□□□ -1.98
MSH6P52701 AL513185.3-201ENST00000433335 1300 ntBASIC2.67□□□□□ -1.98
MSH6P52701 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MSH6P52701 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MSH6P52701 OR4G11P-202ENST00000642116 1414 ntBASIC2.66□□□□□ -1.98
MSH6P52701 RNU1-57P-201ENST00000384491 166 ntBASIC2.66□□□□□ -1.98
MSH6P52701 AL356131.1-201ENST00000405826 414 ntBASIC2.66□□□□□ -1.98
MSH6P52701 MTND1P23-201ENST00000416931 372 ntBASIC2.66□□□□□ -1.98
MSH6P52701 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.66□□□□□ -1.98
MSH6P52701 SNRPEP4-201ENST00000435815 279 ntBASIC2.66□□□□□ -1.98
MSH6P52701 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.66□□□□□ -1.98
MSH6P52701 RPL23AP58-201ENST00000440453 469 ntBASIC2.66□□□□□ -1.98
MSH6P52701 MTATP6P14-201ENST00000455189 673 ntBASIC2.66□□□□□ -1.98
MSH6P52701 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.66□□□□□ -1.98
MSH6P52701 CBX3P3-201ENST00000508108 532 ntBASIC2.66□□□□□ -1.98
MSH6P52701 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.66□□□□□ -1.98
MSH6P52701 RNU6-250P-201ENST00000516958 103 ntBASIC2.66□□□□□ -1.98
MSH6P52701 SLC2A13P1-201ENST00000531560 322 ntBASIC2.66□□□□□ -1.98
MSH6P52701 AC005832.3-201ENST00000537929 631 ntBASIC2.66□□□□□ -1.98
MSH6P52701 HSPE1P20-201ENST00000538133 289 ntBASIC2.66□□□□□ -1.98
MSH6P52701 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.66□□□□□ -1.98
MSH6P52701 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.66□□□□□ -1.98
MSH6P52701 DNAJC8P1-201ENST00000554535 372 ntBASIC2.66□□□□□ -1.98
MSH6P52701 AL132657.2-201ENST00000564417 358 ntBASIC2.66□□□□□ -1.98
MSH6P52701 COX6CP3-201ENST00000580869 223 ntBASIC2.66□□□□□ -1.98
MSH6P52701 AC069431.2-201ENST00000604149 1099 ntBASIC2.66□□□□□ -1.98
MSH6P52701 AC106900.2-201ENST00000604994 317 ntBASIC2.66□□□□□ -1.98
MSH6P52701 AC243773.3-201ENST00000613270 256 ntBASIC2.66□□□□□ -1.98
MSH6P52701 AL121895.2-201ENST00000619558 447 ntBASIC2.66□□□□□ -1.98
MSH6P52701 AC009269.6-201ENST00000621778 588 ntBASIC2.66□□□□□ -1.98
MSH6P52701 LINC02211-204ENST00000642024 1070 ntBASIC2.66□□□□□ -1.98
MSH6P52701 KPNA2P1-201ENST00000458289 1591 ntBASIC2.66□□□□□ -1.98
MSH6P52701 AC012321.1-201ENST00000561622 1588 ntBASIC2.66□□□□□ -1.98
MSH6P52701 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.65□□□□□ -1.98
MSH6P52701 RNU6-173P-201ENST00000364215 104 ntBASIC2.65□□□□□ -1.98
MSH6P52701 Y_RNA.472-201ENST00000384322 102 ntBASIC2.65□□□□□ -1.98
MSH6P52701 MIR135A2-201ENST00000384854 100 ntBASIC2.65□□□□□ -1.98
MSH6P52701 RNA5SP492-201ENST00000411330 114 ntBASIC2.65□□□□□ -1.98
MSH6P52701 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.65□□□□□ -1.98
MSH6P52701 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.65□□□□□ -1.98
MSH6P52701 BEND7P1-201ENST00000422058 457 ntBASIC2.65□□□□□ -1.98
MSH6P52701 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
MSH6P52701 AC019178.2-201ENST00000423595 505 ntBASIC2.65□□□□□ -1.98
MSH6P52701 MTATP6P4-201ENST00000427725 675 ntBASIC2.65□□□□□ -1.98
MSH6P52701 MTCO1P53-201ENST00000441633 699 ntBASIC2.65□□□□□ -1.98
MSH6P52701 AL589880.1-201ENST00000448271 287 ntBASIC2.65□□□□□ -1.98
MSH6P52701 RPL18AP17-201ENST00000455326 198 ntBASIC2.65□□□□□ -1.98
MSH6P52701 AC104435.1-201ENST00000483483 166 ntBASIC2.65□□□□□ -1.98
MSH6P52701 AC114981.1-201ENST00000503897 678 ntBASIC2.65□□□□□ -1.98
MSH6P52701 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.65□□□□□ -1.98
MSH6P52701 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.65□□□□□ -1.98
MSH6P52701 RNU6-583P-201ENST00000516012 92 ntBASIC2.65□□□□□ -1.98
MSH6P52701 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.65□□□□□ -1.98
MSH6P52701 AC022690.1-201ENST00000526681 550 ntBASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms