Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC006111.3-201ENST00000622137 383 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.33□□□□□ -1.88
CLCNKAP51800 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
CLCNKAP51800 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLCNKAP51800 AC058791.1-201ENST00000608412 3198 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
CLCNKAP51800 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CLCNKAP51800 AC017071.1-201ENST00000564407 2204 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCNKAP51800 SNORD56.2-201ENST00000363242 71 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 RNY1P12-201ENST00000364251 105 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 SNORA23-201ENST00000365128 182 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 RNU1-39P-201ENST00000383897 165 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 Y_RNA.409-201ENST00000383990 98 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 RNU6-1103P-201ENST00000384150 107 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLCNKAP51800 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 RNU2-36P-201ENST00000410361 191 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.32□□□□□ -1.88
CLCNKAP51800 RPL21P24-201ENST00000413752 448 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 Z99755.1-201ENST00000414048 380 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCNKAP51800 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCNKAP51800 MTCO2P19-201ENST00000427513 598 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 AC005326.1-201ENST00000429197 123 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 AL158071.1-201ENST00000430315 461 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 MTND3P21-201ENST00000433774 331 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 AC024082.2-201ENST00000434771 238 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 MTATP6P13-201ENST00000438531 667 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 AL121871.1-201ENST00000443413 436 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 Z99127.3-201ENST00000448158 395 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.32□□□□□ -1.88
CLCNKAP51800 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCNKAP51800 AC008481.1-201ENST00000463278 396 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLCNKAP51800 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCNKAP51800 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCNKAP51800 AC011352.1-201ENST00000512300 793 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCNKAP51800 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCNKAP51800 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.32□□□□□ -1.88
CLCNKAP51800 RNU6-718P-201ENST00000516166 105 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 SNORA31.22-201ENST00000517204 135 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 RNU6-711P-201ENST00000517255 106 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 AC090572.1-201ENST00000519251 160 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLCNKAP51800 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCNKAP51800 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.32□□□□□ -1.88
CLCNKAP51800 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCNKAP51800 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.32□□□□□ -1.88
CLCNKAP51800 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCNKAP51800 U6atac.1-201ENST00000616025 117 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLCNKAP51800 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CLCNKAP51800 AL359880.1-201ENST00000621879 266 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 TAB3P1-202ENST00000452645 1634 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 AL021368.2-201ENST00000606125 5352 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 AL513302.2-201ENST00000562313 1842 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 AC009812.4-201ENST00000569134 1805 ntBASIC3.32□□□□□ -1.88
CLCNKAP51800 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLCNKAP51800 AC010733.2-201ENST00000589496 5702 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.31□□□□□ -1.88
CLCNKAP51800 AC073346.2-201ENST00000624724 2058 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 CR848007.1-201ENST00000442354 1699 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLCNKAP51800 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.31□□□□□ -1.88
CLCNKAP51800 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLCNKAP51800 Y_RNA.159-201ENST00000363674 87 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 U3.11-201ENST00000364476 212 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 RNU6-456P-201ENST00000384493 107 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 U3.19-201ENST00000390893 196 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 RNU1-101P-201ENST00000391171 127 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 RNA5SP120-201ENST00000410900 112 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCNKAP51800 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.31□□□□□ -1.88
CLCNKAP51800 AC137499.1-201ENST00000427602 88 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 MTATP6P4-201ENST00000427725 675 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 RPL26P6-201ENST00000440913 438 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 MTCO3P45-201ENST00000443036 613 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 AC016696.1-201ENST00000446949 318 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLCNKAP51800 AC140076.1-201ENST00000449897 361 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 SNRPGP6-201ENST00000451124 220 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 AC013267.1-201ENST00000458227 267 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 RPL23AP67-201ENST00000465341 474 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.31□□□□□ -1.88
CLCNKAP51800 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLCNKAP51800 AC023194.1-201ENST00000493084 308 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCNKAP51800 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.31□□□□□ -1.88
CLCNKAP51800 ERHP1-201ENST00000523006 310 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 FAM60DP-201ENST00000524174 632 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.31□□□□□ -1.88
CLCNKAP51800 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCNKAP51800 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCNKAP51800 AF038458.1-201ENST00000588406 262 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 GLUD1P4-201ENST00000590914 418 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 Z84480.1-201ENST00000605131 311 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms