Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AC008498.1-201ENST00000613012 531 ntBASIC2.35□□□□□ -2.03
RFX3P48380 AC010133.1-201ENST00000615809 842 ntBASIC2.35□□□□□ -2.03
RFX3P48380 AC068057.2-201ENST00000624047 895 ntBASIC2.35□□□□□ -2.03
RFX3P48380 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.35□□□□□ -2.03
RFX3P48380 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.35□□□□□ -2.03
RFX3P48380 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFX3P48380 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFX3P48380 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RFX3P48380 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RFX3P48380 AC062016.1-201ENST00000355719 319 ntBASIC2.34□□□□□ -2.03
RFX3P48380 RNU6-289P-201ENST00000364093 107 ntBASIC2.34□□□□□ -2.03
RFX3P48380 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.34□□□□□ -2.03
RFX3P48380 TAS2R15P-201ENST00000390674 928 ntBASIC2.34□□□□□ -2.03
RFX3P48380 AL590084.2-201ENST00000401481 382 ntBASIC2.34□□□□□ -2.03
RFX3P48380 AL162578.1-201ENST00000406202 378 ntBASIC2.34□□□□□ -2.03
RFX3P48380 RNU6-1328P-201ENST00000410938 106 ntBASIC2.34□□□□□ -2.03
RFX3P48380 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.34□□□□□ -2.03
RFX3P48380 ELOCP9-201ENST00000418624 239 ntBASIC2.34□□□□□ -2.03
RFX3P48380 NUP35P1-201ENST00000422734 947 ntBASIC2.34□□□□□ -2.03
RFX3P48380 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.34□□□□□ -2.03
RFX3P48380 RPS12P2-201ENST00000439728 269 ntBASIC2.34□□□□□ -2.03
RFX3P48380 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.34□□□□□ -2.03
RFX3P48380 AC004854.1-201ENST00000440356 349 ntBASIC2.34□□□□□ -2.03
RFX3P48380 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.34□□□□□ -2.03
RFX3P48380 PTENP1-201ENST00000447117 1215 ntBASIC2.34□□□□□ -2.03
RFX3P48380 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.34□□□□□ -2.03
RFX3P48380 DUXAP8-207ENST00000456786 622 ntBASIC2.34□□□□□ -2.03
RFX3P48380 RPS20P22-201ENST00000473700 357 ntBASIC2.34□□□□□ -2.03
RFX3P48380 AC034222.1-201ENST00000494052 532 ntBASIC2.34□□□□□ -2.03
RFX3P48380 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.34□□□□□ -2.03
RFX3P48380 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.34□□□□□ -2.03
RFX3P48380 SNORA31.15-201ENST00000516771 132 ntBASIC2.34□□□□□ -2.03
RFX3P48380 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.34□□□□□ -2.03
RFX3P48380 AC243972.3-201ENST00000539655 198 ntBASIC2.34□□□□□ -2.03
RFX3P48380 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.34□□□□□ -2.03
RFX3P48380 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.34□□□□□ -2.03
RFX3P48380 VN1R82P-201ENST00000601481 356 ntBASIC2.34□□□□□ -2.03
RFX3P48380 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.34□□□□□ -2.03
RFX3P48380 RNU6-88P-201ENST00000606801 100 ntBASIC2.34□□□□□ -2.03
RFX3P48380 TUG1_2.1-201ENST00000614234 87 ntBASIC2.34□□□□□ -2.03
RFX3P48380 FO624990.1-201ENST00000636373 85 ntBASIC2.34□□□□□ -2.03
RFX3P48380 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.34□□□□□ -2.03
RFX3P48380 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RFX3P48380 AC099063.3-201ENST00000642066 185 ntBASIC2.34□□□□□ -2.03
RFX3P48380 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.33□□□□□ -2.04
RFX3P48380 AC009902.3-201ENST00000606235 2172 ntBASIC2.33□□□□□ -2.04
RFX3P48380 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
RFX3P48380 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
RFX3P48380 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.33□□□□□ -2.04
RFX3P48380 RN7SKP266-201ENST00000410232 287 ntBASIC2.33□□□□□ -2.04
RFX3P48380 RNU2-49P-201ENST00000410666 184 ntBASIC2.33□□□□□ -2.04
RFX3P48380 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.33□□□□□ -2.04
RFX3P48380 MTCO2P23-201ENST00000425216 680 ntBASIC2.33□□□□□ -2.04
RFX3P48380 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.33□□□□□ -2.04
RFX3P48380 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.33□□□□□ -2.04
RFX3P48380 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.33□□□□□ -2.04
RFX3P48380 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.33□□□□□ -2.04
RFX3P48380 AC104389.3-201ENST00000445629 235 ntBASIC2.33□□□□□ -2.04
RFX3P48380 EEF1E1P1-201ENST00000446998 430 ntBASIC2.33□□□□□ -2.04
RFX3P48380 AL109933.2-201ENST00000452651 260 ntBASIC2.33□□□□□ -2.04
RFX3P48380 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.33□□□□□ -2.04
RFX3P48380 RPL23AP45-201ENST00000476406 468 ntBASIC2.33□□□□□ -2.04
RFX3P48380 AC135721.1-201ENST00000497954 479 ntBASIC2.33□□□□□ -2.04
RFX3P48380 RPL37P25-201ENST00000507308 276 ntBASIC2.33□□□□□ -2.04
RFX3P48380 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.33□□□□□ -2.04
RFX3P48380 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.33□□□□□ -2.04
RFX3P48380 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.33□□□□□ -2.04
RFX3P48380 RNA5SP291-201ENST00000517222 105 ntBASIC2.33□□□□□ -2.04
RFX3P48380 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.33□□□□□ -2.04
RFX3P48380 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.33□□□□□ -2.04
RFX3P48380 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RFX3P48380 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.33□□□□□ -2.04
RFX3P48380 MTND1P8-201ENST00000571424 950 ntBASIC2.33□□□□□ -2.04
RFX3P48380 MIR5092-201ENST00000583139 88 ntBASIC2.33□□□□□ -2.04
RFX3P48380 MIR4658-201ENST00000584344 65 ntBASIC2.33□□□□□ -2.04
RFX3P48380 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.33□□□□□ -2.04
RFX3P48380 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.33□□□□□ -2.04
RFX3P48380 AC002545.1-201ENST00000592511 181 ntBASIC2.33□□□□□ -2.04
RFX3P48380 AC080013.3-201ENST00000606839 578 ntBASIC2.33□□□□□ -2.04
RFX3P48380 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.33□□□□□ -2.04
RFX3P48380 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.33□□□□□ -2.04
RFX3P48380 AC106754.1-201ENST00000562632 1513 ntBASIC2.32□□□□□ -2.04
RFX3P48380 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.32□□□□□ -2.04
RFX3P48380 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.32□□□□□ -2.04
RFX3P48380 RN7SKP226-201ENST00000364912 300 ntBASIC2.32□□□□□ -2.04
RFX3P48380 TXNP7-201ENST00000406296 293 ntBASIC2.32□□□□□ -2.04
RFX3P48380 MIR320C1-201ENST00000408566 88 ntBASIC2.32□□□□□ -2.04
RFX3P48380 AL513331.1-201ENST00000411908 397 ntBASIC2.32□□□□□ -2.04
RFX3P48380 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RFX3P48380 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX3P48380 MTCO2P17-201ENST00000424336 677 ntBASIC2.32□□□□□ -2.04
RFX3P48380 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX3P48380 TXNL1P1-201ENST00000429528 554 ntBASIC2.32□□□□□ -2.04
RFX3P48380 RPS15AP5-201ENST00000436276 388 ntBASIC2.32□□□□□ -2.04
RFX3P48380 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.32□□□□□ -2.04
RFX3P48380 MTCO2P20-201ENST00000437339 673 ntBASIC2.32□□□□□ -2.04
RFX3P48380 MTND3P1-201ENST00000441336 220 ntBASIC2.32□□□□□ -2.04
RFX3P48380 MTCO1P27-201ENST00000448269 226 ntBASIC2.32□□□□□ -2.04
RFX3P48380 AC009961.3-201ENST00000449832 765 ntBASIC2.32□□□□□ -2.04
RFX3P48380 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms