Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 MTND1P21-201ENST00000412991 285 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 PPP1R11P2-201ENST00000423543 382 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 CYCSP46-201ENST00000423569 204 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.84□□□□□ -1.95
BRCC3P46736 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.84□□□□□ -1.95
BRCC3P46736 AC118469.1-201ENST00000442943 488 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 AL359385.1-201ENST00000456509 365 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 RPS3P1-201ENST00000456781 192 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 AC021382.1-201ENST00000483523 359 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 AC106872.3-201ENST00000495104 446 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.84□□□□□ -1.95
BRCC3P46736 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.84□□□□□ -1.95
BRCC3P46736 AF131216.2-201ENST00000512316 564 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.84□□□□□ -1.95
BRCC3P46736 AC117532.1-201ENST00000514638 323 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 AC116347.2-201ENST00000514912 523 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 SNORA31.1-201ENST00000515993 133 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 SNORA31.5-201ENST00000516190 133 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 RNA5SP148-201ENST00000516527 94 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.84□□□□□ -1.95
BRCC3P46736 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.84□□□□□ -1.95
BRCC3P46736 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.84□□□□□ -1.95
BRCC3P46736 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.84□□□□□ -1.95
BRCC3P46736 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.84□□□□□ -1.95
BRCC3P46736 AC012119.1-201ENST00000603184 222 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 Z94722.1-201ENST00000604328 474 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 AP000254.1-201ENST00000609934 520 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 AC004908.3-201ENST00000610248 625 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 AC093783.1-201ENST00000612976 329 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 MIR6817-201ENST00000615588 66 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 AC027807.2-201ENST00000616099 408 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.84□□□□□ -1.95
BRCC3P46736 AC090617.7-201ENST00000623952 126 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 AL359693.1-201ENST00000614959 2407 ntBASIC2.84□□□□□ -1.95
BRCC3P46736 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
BRCC3P46736 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.96
BRCC3P46736 MTCO1P9-201ENST00000505577 1534 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AL355596.1-201ENST00000565399 3996 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
BRCC3P46736 MIR493-201ENST00000385254 89 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
BRCC3P46736 Z99497.1-201ENST00000421282 135 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 NDUFB4P7-201ENST00000423198 363 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.83□□□□□ -1.96
BRCC3P46736 NDUFB4P6-201ENST00000436819 366 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.83□□□□□ -1.96
BRCC3P46736 COX6CP12-201ENST00000446748 202 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 Z83846.1-201ENST00000446798 265 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AL590664.1-201ENST00000448065 339 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AC234775.1-201ENST00000454247 670 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 RNA5SP310-201ENST00000459084 116 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.83□□□□□ -1.96
BRCC3P46736 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.83□□□□□ -1.96
BRCC3P46736 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.83□□□□□ -1.96
BRCC3P46736 AC117522.2-201ENST00000510049 657 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.83□□□□□ -1.96
BRCC3P46736 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.83□□□□□ -1.96
BRCC3P46736 AP002748.2-201ENST00000528671 348 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.83□□□□□ -1.96
BRCC3P46736 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.83□□□□□ -1.96
BRCC3P46736 AL133271.1-201ENST00000538229 291 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.83□□□□□ -1.96
BRCC3P46736 AC125611.2-201ENST00000551907 647 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.83□□□□□ -1.96
BRCC3P46736 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
BRCC3P46736 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.83□□□□□ -1.96
BRCC3P46736 PCMTD1P2-201ENST00000565017 355 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.83□□□□□ -1.96
BRCC3P46736 MIR5697-201ENST00000578045 78 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 MIR3605-201ENST00000583214 100 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 MIR4635-201ENST00000583759 79 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AC012065.4-201ENST00000602445 679 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AP001981.2-201ENST00000603241 418 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AC105129.3-201ENST00000605455 485 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AC008962.1-201ENST00000605729 304 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AL627309.6-201ENST00000606857 840 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AL158211.4-201ENST00000606988 584 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AC091965.4-201ENST00000607691 587 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AC239868.4-201ENST00000608318 671 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AL355472.4-201ENST00000610233 626 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 AC008443.7-201ENST00000622195 246 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.83□□□□□ -1.96
BRCC3P46736 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.83□□□□□ -1.96
BRCC3P46736 LRRC77P-213ENST00000637727 880 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
BRCC3P46736 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
BRCC3P46736 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
BRCC3P46736 AC005832.2-201ENST00000538921 1430 ntBASIC2.83□□□□□ -1.96
BRCC3P46736 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.83□□□□□ -1.96
BRCC3P46736 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
BRCC3P46736 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
BRCC3P46736 AC108206.1-201ENST00000570186 4159 ntBASIC2.82□□□□□ -1.96
BRCC3P46736 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
BRCC3P46736 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
BRCC3P46736 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
BRCC3P46736 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
BRCC3P46736 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
BRCC3P46736 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
BRCC3P46736 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
BRCC3P46736 RNU6-809P-201ENST00000384461 107 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms