Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.57□□□□□ -2
SSR1P43307 AC093838.1-201ENST00000613014 469 ntBASIC2.57□□□□□ -2
SSR1P43307 AL162373.1-201ENST00000620433 407 ntBASIC2.57□□□□□ -2
SSR1P43307 AC098657.3-201ENST00000620434 263 ntBASIC2.57□□□□□ -2
SSR1P43307 AC009269.6-201ENST00000621778 588 ntBASIC2.57□□□□□ -2
SSR1P43307 AL049777.1-201ENST00000622740 518 ntBASIC2.57□□□□□ -2
SSR1P43307 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.57□□□□□ -2
SSR1P43307 AL158801.5-201ENST00000623123 465 ntBASIC2.57□□□□□ -2
SSR1P43307 CENPCP1-201ENST00000533085 2578 ntBASIC2.56□□□□□ -2
SSR1P43307 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SSR1P43307 AL138713.1-201ENST00000624026 2130 ntBASIC2.56□□□□□ -2
SSR1P43307 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SSR1P43307 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SSR1P43307 RNA5SP184-201ENST00000411071 108 ntBASIC2.56□□□□□ -2
SSR1P43307 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.56□□□□□ -2
SSR1P43307 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
SSR1P43307 UBE2FP1-201ENST00000416536 447 ntBASIC2.56□□□□□ -2
SSR1P43307 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.56□□□□□ -2
SSR1P43307 USP12PX-201ENST00000432383 1057 ntBASIC2.56□□□□□ -2
SSR1P43307 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.56□□□□□ -2
SSR1P43307 AC107626.1-201ENST00000471084 183 ntBASIC2.56□□□□□ -2
SSR1P43307 RN7SL432P-201ENST00000484057 298 ntBASIC2.56□□□□□ -2
SSR1P43307 AC138853.1-201ENST00000503549 823 ntBASIC2.56□□□□□ -2
SSR1P43307 RNA5SP356-201ENST00000515972 94 ntBASIC2.56□□□□□ -2
SSR1P43307 NRON-201ENST00000517270 370 ntBASIC2.56□□□□□ -2
SSR1P43307 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.56□□□□□ -2
SSR1P43307 AC022634.1-201ENST00000520765 532 ntBASIC2.56□□□□□ -2
SSR1P43307 AC087241.2-201ENST00000535801 324 ntBASIC2.56□□□□□ -2
SSR1P43307 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.56□□□□□ -2
SSR1P43307 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.56□□□□□ -2
SSR1P43307 AC061975.8-201ENST00000587058 721 ntBASIC2.56□□□□□ -2
SSR1P43307 AC002984.1-201ENST00000591692 448 ntBASIC2.56□□□□□ -2
SSR1P43307 AC008749.1-201ENST00000597650 306 ntBASIC2.56□□□□□ -2
SSR1P43307 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.56□□□□□ -2
SSR1P43307 APOOP1-201ENST00000604695 592 ntBASIC2.56□□□□□ -2
SSR1P43307 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.56□□□□□ -2
SSR1P43307 AL157392.4-201ENST00000609756 345 ntBASIC2.56□□□□□ -2
SSR1P43307 AP002371.2-201ENST00000624450 503 ntBASIC2.56□□□□□ -2
SSR1P43307 AC019226.1-201ENST00000625666 515 ntBASIC2.56□□□□□ -2
SSR1P43307 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.56□□□□□ -2
SSR1P43307 AP003399.1-201ENST00000637534 361 ntBASIC2.56□□□□□ -2
SSR1P43307 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.56□□□□□ -2
SSR1P43307 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.56□□□□□ -2
SSR1P43307 DDX10P1-201ENST00000448545 1933 ntBASIC2.56□□□□□ -2
SSR1P43307 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.56□□□□□ -2
SSR1P43307 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SSR1P43307 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SSR1P43307 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SSR1P43307 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SSR1P43307 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
SSR1P43307 AL161781.1-201ENST00000354277 403 ntBASIC2.55□□□□□ -2
SSR1P43307 Y_RNA.311-201ENST00000365068 96 ntBASIC2.55□□□□□ -2
SSR1P43307 SNORA41-201ENST00000384675 132 ntBASIC2.55□□□□□ -2
SSR1P43307 RNU2-49P-201ENST00000410666 184 ntBASIC2.55□□□□□ -2
SSR1P43307 USP9YP33-201ENST00000412220 421 ntBASIC2.55□□□□□ -2
SSR1P43307 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.55□□□□□ -2
SSR1P43307 BTF3L4P3-201ENST00000418879 476 ntBASIC2.55□□□□□ -2
SSR1P43307 AL590383.1-201ENST00000428602 75 ntBASIC2.55□□□□□ -2
SSR1P43307 AC010153.1-201ENST00000432862 727 ntBASIC2.55□□□□□ -2
SSR1P43307 USP9YP35-201ENST00000435696 412 ntBASIC2.55□□□□□ -2
SSR1P43307 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.55□□□□□ -2
SSR1P43307 AC007327.1-201ENST00000447461 264 ntBASIC2.55□□□□□ -2
SSR1P43307 TPT1P14-201ENST00000448018 505 ntBASIC2.55□□□□□ -2
SSR1P43307 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.55□□□□□ -2
SSR1P43307 RPL21P134-201ENST00000453468 483 ntBASIC2.55□□□□□ -2
SSR1P43307 AP1S2P1-201ENST00000457344 379 ntBASIC2.55□□□□□ -2
SSR1P43307 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.55□□□□□ -2
SSR1P43307 RNU7-193P-201ENST00000516723 65 ntBASIC2.55□□□□□ -2
SSR1P43307 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.55□□□□□ -2
SSR1P43307 AC074050.1-201ENST00000563247 211 ntBASIC2.55□□□□□ -2
SSR1P43307 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.55□□□□□ -2
SSR1P43307 OR4K7P-201ENST00000580232 945 ntBASIC2.55□□□□□ -2
SSR1P43307 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.55□□□□□ -2
SSR1P43307 AC021749.1-201ENST00000604322 607 ntBASIC2.55□□□□□ -2
SSR1P43307 U4.3-201ENST00000621047 82 ntBASIC2.55□□□□□ -2
SSR1P43307 AC068057.2-201ENST00000624047 895 ntBASIC2.55□□□□□ -2
SSR1P43307 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.54□□□□□ -2
SSR1P43307 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.54□□□□□ -2
SSR1P43307 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
SSR1P43307 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.54□□□□□ -2
SSR1P43307 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SSR1P43307 AC062016.1-201ENST00000355719 319 ntBASIC2.54□□□□□ -2
SSR1P43307 RNU6-853P-201ENST00000364306 107 ntBASIC2.54□□□□□ -2
SSR1P43307 SNORD114-30-201ENST00000364448 72 ntBASIC2.54□□□□□ -2
SSR1P43307 RNU6-140P-201ENST00000384566 108 ntBASIC2.54□□□□□ -2
SSR1P43307 RNU6-516P-201ENST00000411381 104 ntBASIC2.54□□□□□ -2
SSR1P43307 FCF1P1-201ENST00000432690 571 ntBASIC2.54□□□□□ -2
SSR1P43307 Z82210.1-201ENST00000440037 231 ntBASIC2.54□□□□□ -2
SSR1P43307 MTCO2P25-201ENST00000447065 681 ntBASIC2.54□□□□□ -2
SSR1P43307 MTATP6P7-201ENST00000453315 681 ntBASIC2.54□□□□□ -2
SSR1P43307 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.54□□□□□ -2
SSR1P43307 RPS20P20-201ENST00000460498 340 ntBASIC2.54□□□□□ -2
SSR1P43307 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.54□□□□□ -2
SSR1P43307 RPS15AP36-201ENST00000492022 382 ntBASIC2.54□□□□□ -2
SSR1P43307 AC079395.1-201ENST00000510981 262 ntBASIC2.54□□□□□ -2
SSR1P43307 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.54□□□□□ -2
SSR1P43307 RNU6-1282P-201ENST00000516735 96 ntBASIC2.54□□□□□ -2
SSR1P43307 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.54□□□□□ -2
SSR1P43307 UBTFL10-201ENST00000528532 562 ntBASIC2.54□□□□□ -2
SSR1P43307 OR5BN1P-201ENST00000532955 829 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms