Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 GLUD1P4-201ENST00000590914 418 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.01□□□□□ -2.09
COL18A1P39060 AL157834.3-201ENST00000615543 103 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 AP000676.4-201ENST00000624659 623 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.01□□□□□ -2.09
COL18A1P39060 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.01□□□□□ -2.09
COL18A1P39060 AC008568.2-201ENST00000623862 2313 ntBASIC2.01□□□□□ -2.09
COL18A1P39060 RNU6-492P-201ENST00000363035 104 ntBASIC2□□□□□ -2.09
COL18A1P39060 SNORD114-22-201ENST00000365423 72 ntBASIC2□□□□□ -2.09
COL18A1P39060 SNORD51-201ENST00000384320 80 ntBASIC2□□□□□ -2.09
COL18A1P39060 RPS4XP3-201ENST00000398541 413 ntBASIC2□□□□□ -2.09
COL18A1P39060 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2□□□□□ -2.09
COL18A1P39060 RPL7P30-201ENST00000420888 709 ntBASIC2□□□□□ -2.09
COL18A1P39060 RPL27AP8-201ENST00000424277 446 ntBASIC2□□□□□ -2.09
COL18A1P39060 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2□□□□□ -2.09
COL18A1P39060 AC073901.1-201ENST00000462471 408 ntBASIC2□□□□□ -2.09
COL18A1P39060 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2□□□□□ -2.09
COL18A1P39060 AC013828.1-201ENST00000481845 158 ntBASIC2□□□□□ -2.09
COL18A1P39060 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2□□□□□ -2.09
COL18A1P39060 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2□□□□□ -2.09
COL18A1P39060 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2□□□□□ -2.09
COL18A1P39060 AC091057.2-201ENST00000602594 792 ntBASIC2□□□□□ -2.09
COL18A1P39060 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2□□□□□ -2.09
COL18A1P39060 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2□□□□□ -2.09
COL18A1P39060 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2□□□□□ -2.09
COL18A1P39060 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2□□□□□ -2.09
COL18A1P39060 U8.1-201ENST00000362843 134 ntBASIC2□□□□□ -2.09
COL18A1P39060 Y_RNA.354-201ENST00000365448 111 ntBASIC2□□□□□ -2.09
COL18A1P39060 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2□□□□□ -2.09
COL18A1P39060 AL121871.1-201ENST00000443413 436 ntBASIC2□□□□□ -2.09
COL18A1P39060 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2□□□□□ -2.09
COL18A1P39060 DPPA3P1-201ENST00000448050 469 ntBASIC2□□□□□ -2.09
COL18A1P39060 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2□□□□□ -2.09
COL18A1P39060 SETP11-201ENST00000473027 690 ntBASIC2□□□□□ -2.09
COL18A1P39060 CBX3P3-201ENST00000508108 532 ntBASIC2□□□□□ -2.09
COL18A1P39060 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2□□□□□ -2.09
COL18A1P39060 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2□□□□□ -2.09
COL18A1P39060 SEPT7P9-203ENST00000604116 343 ntBASIC2□□□□□ -2.09
COL18A1P39060 AC138915.1-201ENST00000565427 1685 ntBASIC1.99□□□□□ -2.09
COL18A1P39060 SUMO2P12-201ENST00000405924 140 ntBASIC1.99□□□□□ -2.09
COL18A1P39060 AL158053.1-201ENST00000441503 453 ntBASIC1.99□□□□□ -2.09
COL18A1P39060 AL031183.1-201ENST00000457667 207 ntBASIC1.99□□□□□ -2.09
COL18A1P39060 AC009901.1-201ENST00000506703 541 ntBASIC1.99□□□□□ -2.09
COL18A1P39060 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL18A1P39060 AP002748.2-201ENST00000528671 348 ntBASIC1.99□□□□□ -2.09
COL18A1P39060 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.99□□□□□ -2.09
COL18A1P39060 AC022709.1-201ENST00000615967 87 ntBASIC1.99□□□□□ -2.09
COL18A1P39060 OR4G1P-203ENST00000641984 1631 ntBASIC1.99□□□□□ -2.09
COL18A1P39060 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
COL18A1P39060 HSPE1P11-201ENST00000339579 310 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 RPL23AP29-201ENST00000397284 453 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 BEND7P1-201ENST00000422058 457 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AC079780.1-201ENST00000428259 207 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.98□□□□□ -2.09
COL18A1P39060 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.98□□□□□ -2.09
COL18A1P39060 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.98□□□□□ -2.09
COL18A1P39060 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.98□□□□□ -2.09
COL18A1P39060 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL18A1P39060 HMGN1P7-201ENST00000491722 313 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AC091860.1-201ENST00000505723 432 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 RNU6-885P-201ENST00000516607 104 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.98□□□□□ -2.09
COL18A1P39060 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.98□□□□□ -2.09
COL18A1P39060 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.98□□□□□ -2.09
COL18A1P39060 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.98□□□□□ -2.09
COL18A1P39060 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL18A1P39060 AL356585.4-201ENST00000623078 1229 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AC093875.1-201ENST00000623688 504 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.98□□□□□ -2.09
COL18A1P39060 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
COL18A1P39060 MTCO1P23-201ENST00000415223 1526 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL18A1P39060 DEFB108F-201ENST00000344638 222 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 SNORD114-26-201ENST00000363543 72 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 SNORD56.5-201ENST00000364281 72 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AC016769.3-201ENST00000396562 315 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AL355615.1-201ENST00000406187 641 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 RNU2-47P-201ENST00000410649 186 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AC092638.1-201ENST00000411966 1275 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.98□□□□□ -2.09
COL18A1P39060 HMGN2P30-201ENST00000423237 256 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 MTCYBP15-201ENST00000433123 1127 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 Z96811.1-201ENST00000445880 108 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 RPL21P131-201ENST00000497298 483 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 COX7A2P2-201ENST00000505291 250 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 SNORA31.24-201ENST00000517232 57 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AC104986.1-201ENST00000517978 436 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 DEFB108D-201ENST00000527787 222 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.98□□□□□ -2.09
COL18A1P39060 AC008127.2-201ENST00000549925 1075 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 NBEAP1-201ENST00000554452 979 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.98□□□□□ -2.09
COL18A1P39060 MIR4666A-201ENST00000580160 79 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AC012493.3-201ENST00000604494 112 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AC012443.1-201ENST00000605605 231 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AP005229.2-201ENST00000609980 697 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AL353770.2-201ENST00000620024 78 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 AC080188.3-201ENST00000624842 748 ntBASIC1.98□□□□□ -2.09
COL18A1P39060 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.98□□□□□ -2.09
COL18A1P39060 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms