Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.5□□□□□ -2.17
CLIP1P30622 MIR5000-201ENST00000577717 103 ntBASIC1.5□□□□□ -2.17
CLIP1P30622 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.5□□□□□ -2.17
CLIP1P30622 BNIP3P7-201ENST00000605641 516 ntBASIC1.5□□□□□ -2.17
CLIP1P30622 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.5□□□□□ -2.17
CLIP1P30622 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CLIP1P30622 RNU1-133P-201ENST00000364867 167 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 AL589994.1-201ENST00000404962 340 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.49□□□□□ -2.17
CLIP1P30622 RNU6-928P-201ENST00000516876 104 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.49□□□□□ -2.17
CLIP1P30622 AL121821.2-201ENST00000556081 394 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 DPRXP5-201ENST00000604662 539 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 AC113194.1-201ENST00000606037 500 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CLIP1P30622 AL034374.1-201ENST00000406329 351 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.49□□□□□ -2.17
CLIP1P30622 AC009296.1-201ENST00000443146 155 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 OSTCP8-201ENST00000445117 448 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.49□□□□□ -2.17
CLIP1P30622 AC010099.1-201ENST00000455434 375 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 HSPE1P4-201ENST00000550617 308 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 AC008269.2-201ENST00000561915 1105 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 AC233266.2-201ENST00000567067 528 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 AC139769.3-201ENST00000618383 175 ntBASIC1.49□□□□□ -2.17
CLIP1P30622 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.49□□□□□ -2.17
CLIP1P30622 CUL4AP1-201ENST00000514750 1863 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 AL356432.1-201ENST00000405809 419 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 Z80107.1-201ENST00000436830 412 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 ARL5AP3-201ENST00000439327 386 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
CLIP1P30622 RFC5P1-201ENST00000454419 874 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 AC022447.3-201ENST00000506865 495 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.48□□□□□ -2.17
CLIP1P30622 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.48□□□□□ -2.17
CLIP1P30622 RNA5SP384-201ENST00000516615 116 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 RNU7-193P-201ENST00000516723 65 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 CYP3A137P-201ENST00000562436 69 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 AC023824.2-201ENST00000566185 400 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 COX6CP3-201ENST00000580869 223 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 AL109918.3-201ENST00000603072 338 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 AC103810.9-201ENST00000606688 112 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 MIR98-201ENST00000606724 119 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.48□□□□□ -2.17
CLIP1P30622 AC003001.2-201ENST00000616294 831 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 AC091304.6-201ENST00000619761 202 ntBASIC1.48□□□□□ -2.17
CLIP1P30622 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.48□□□□□ -2.17
CLIP1P30622 Y_RNA.30-201ENST00000362572 97 ntBASIC1.47□□□□□ -2.17
CLIP1P30622 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.47□□□□□ -2.17
CLIP1P30622 AC118469.1-201ENST00000442943 488 ntBASIC1.47□□□□□ -2.17
CLIP1P30622 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.47□□□□□ -2.17
CLIP1P30622 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.47□□□□□ -2.17
CLIP1P30622 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.47□□□□□ -2.17
CLIP1P30622 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.47□□□□□ -2.17
CLIP1P30622 SNORA31.18-201ENST00000517043 134 ntBASIC1.47□□□□□ -2.17
CLIP1P30622 OR10V3P-201ENST00000525712 725 ntBASIC1.47□□□□□ -2.17
CLIP1P30622 RN7SL793P-201ENST00000583259 296 ntBASIC1.47□□□□□ -2.17
CLIP1P30622 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CLIP1P30622 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CLIP1P30622 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CLIP1P30622 RNU2-32P-201ENST00000411193 191 ntBASIC1.46□□□□□ -2.18
CLIP1P30622 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.46□□□□□ -2.18
CLIP1P30622 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.46□□□□□ -2.18
CLIP1P30622 RPS24P6-201ENST00000452670 400 ntBASIC1.46□□□□□ -2.18
CLIP1P30622 AC093770.1-201ENST00000511559 571 ntBASIC1.46□□□□□ -2.18
CLIP1P30622 CBX3P8-201ENST00000532412 525 ntBASIC1.46□□□□□ -2.18
CLIP1P30622 CBX3P7-201ENST00000532876 502 ntBASIC1.46□□□□□ -2.18
CLIP1P30622 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.46□□□□□ -2.18
CLIP1P30622 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.46□□□□□ -2.18
CLIP1P30622 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.46□□□□□ -2.18
CLIP1P30622 FAM71BP1-201ENST00000604431 523 ntBASIC1.46□□□□□ -2.18
CLIP1P30622 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.46□□□□□ -2.18
CLIP1P30622 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CLIP1P30622 MIR625-201ENST00000385047 85 ntBASIC1.45□□□□□ -2.18
CLIP1P30622 RNA5SP450-201ENST00000411206 102 ntBASIC1.45□□□□□ -2.18
CLIP1P30622 AL133384.1-201ENST00000412744 351 ntBASIC1.45□□□□□ -2.18
CLIP1P30622 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.45□□□□□ -2.18
CLIP1P30622 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.45□□□□□ -2.18
CLIP1P30622 ANKRD26P4-201ENST00000455755 950 ntBASIC1.45□□□□□ -2.18
CLIP1P30622 RPL30P14-201ENST00000482744 348 ntBASIC1.45□□□□□ -2.18
CLIP1P30622 EIF4EP3-201ENST00000498782 656 ntBASIC1.45□□□□□ -2.18
CLIP1P30622 HMGB1P22-201ENST00000505315 124 ntBASIC1.45□□□□□ -2.18
CLIP1P30622 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.45□□□□□ -2.18
CLIP1P30622 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.45□□□□□ -2.18
CLIP1P30622 AC079148.1-201ENST00000565944 819 ntBASIC1.45□□□□□ -2.18
CLIP1P30622 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.45□□□□□ -2.18
CLIP1P30622 AC068880.5-201ENST00000624331 290 ntBASIC1.45□□□□□ -2.18
CLIP1P30622 AC116563.2-201ENST00000624751 535 ntBASIC1.45□□□□□ -2.18
CLIP1P30622 TEX21P-201ENST00000447107 1476 ntBASIC1.45□□□□□ -2.18
CLIP1P30622 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
CLIP1P30622 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CLIP1P30622 RNU6-1105P-201ENST00000384774 107 ntBASIC1.44□□□□□ -2.18
CLIP1P30622 RNU11-5P-201ENST00000391216 129 ntBASIC1.44□□□□□ -2.18
CLIP1P30622 MTND4LP21-201ENST00000415303 295 ntBASIC1.44□□□□□ -2.18
CLIP1P30622 AC234781.2-201ENST00000426370 994 ntBASIC1.44□□□□□ -2.18
CLIP1P30622 AL591212.2-201ENST00000433923 257 ntBASIC1.44□□□□□ -2.18
CLIP1P30622 LDHBP3-201ENST00000514909 822 ntBASIC1.44□□□□□ -2.18
CLIP1P30622 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.44□□□□□ -2.18
CLIP1P30622 AC012254.4-201ENST00000588843 273 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms