Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
CNGA1P29973 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CNGA1P29973 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CNGA1P29973 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CNGA1P29973 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNGA1P29973 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNGA1P29973 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNGA1P29973 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.41□□□□□ -1.7
CNGA1P29973 AL354719.1-201ENST00000406535 843 ntBASIC4.41□□□□□ -1.7
CNGA1P29973 SNRPEP10-201ENST00000420249 274 ntBASIC4.41□□□□□ -1.7
CNGA1P29973 MTCYBP8-201ENST00000422855 651 ntBASIC4.41□□□□□ -1.7
CNGA1P29973 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.41□□□□□ -1.7
CNGA1P29973 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.41□□□□□ -1.7
CNGA1P29973 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.41□□□□□ -1.7
CNGA1P29973 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.41□□□□□ -1.7
CNGA1P29973 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.41□□□□□ -1.7
CNGA1P29973 MTND1P18-201ENST00000448191 573 ntBASIC4.41□□□□□ -1.7
CNGA1P29973 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.41□□□□□ -1.7
CNGA1P29973 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.41□□□□□ -1.7
CNGA1P29973 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.41□□□□□ -1.7
CNGA1P29973 AC106707.2-201ENST00000484182 374 ntBASIC4.41□□□□□ -1.7
CNGA1P29973 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.41□□□□□ -1.7
CNGA1P29973 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.41□□□□□ -1.7
CNGA1P29973 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.41□□□□□ -1.7
CNGA1P29973 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.41□□□□□ -1.7
CNGA1P29973 AC234778.2-201ENST00000566241 354 ntBASIC4.41□□□□□ -1.7
CNGA1P29973 AC008521.1-201ENST00000587471 187 ntBASIC4.41□□□□□ -1.7
CNGA1P29973 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.41□□□□□ -1.7
CNGA1P29973 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNGA1P29973 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNGA1P29973 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNGA1P29973 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.41□□□□□ -1.7
CNGA1P29973 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.41□□□□□ -1.7
CNGA1P29973 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CNGA1P29973 MAPK10-373ENST00000641983 6772 ntBASIC4.4□□□□□ -1.7
CNGA1P29973 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CNGA1P29973 RNU6-451P-201ENST00000362921 107 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 RNVU1-14-201ENST00000384770 164 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 MIR218-2-201ENST00000385006 110 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 UBE2V1P2-201ENST00000397758 440 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 RNU2-29P-201ENST00000410423 189 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 USP9YP6-201ENST00000413550 854 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 AC092809.3-201ENST00000415453 231 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 BX842559.1-201ENST00000419615 532 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 AC245054.1-201ENST00000420944 258 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 AL590383.1-201ENST00000428602 75 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CNGA1P29973 NDUFB4P6-201ENST00000436819 366 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 NFU1P2-201ENST00000448700 469 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 AL118520.1-201ENST00000450770 291 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.4□□□□□ -1.71
CNGA1P29973 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.4□□□□□ -1.71
CNGA1P29973 AL133162.1-201ENST00000463228 453 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 HMGB3P15-201ENST00000507326 574 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 AC117522.3-201ENST00000507974 584 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 TTC39CP1-201ENST00000512513 755 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.4□□□□□ -1.71
CNGA1P29973 RN7SKP18-201ENST00000516005 275 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 SCARNA14-201ENST00000516903 136 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 RNU6-685P-201ENST00000517088 95 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.4□□□□□ -1.71
CNGA1P29973 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.4□□□□□ -1.71
CNGA1P29973 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.4□□□□□ -1.71
CNGA1P29973 AC110741.2-201ENST00000605278 268 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 AL442067.2-201ENST00000614033 363 ntBASIC4.4□□□□□ -1.71
CNGA1P29973 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.4□□□□□ -1.71
CNGA1P29973 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CNGA1P29973 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.4□□□□□ -1.71
CNGA1P29973 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CNGA1P29973 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CNGA1P29973 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.4□□□□□ -1.71
CNGA1P29973 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNGA1P29973 RNU6-552P-201ENST00000362869 119 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CNGA1P29973 RNU6-877P-201ENST00000383868 107 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 RNU6-741P-201ENST00000383889 107 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 U1.1-201ENST00000384101 164 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 RNU6-903P-201ENST00000391270 109 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 AL136116.1-201ENST00000403591 381 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 RNA5SP306-201ENST00000411087 107 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CNGA1P29973 UBE2D3P2-201ENST00000424409 445 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.39□□□□□ -1.71
CNGA1P29973 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.39□□□□□ -1.71
CNGA1P29973 AF228730.2-201ENST00000438784 848 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 RANP8-201ENST00000444720 713 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 AC009237.8-201ENST00000445492 379 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.39□□□□□ -1.71
CNGA1P29973 ELOCP23-201ENST00000452014 332 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 FABP5P13-201ENST00000452144 328 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.39□□□□□ -1.71
CNGA1P29973 RPL9P32-201ENST00000464118 620 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.39□□□□□ -1.71
CNGA1P29973 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.39□□□□□ -1.71
CNGA1P29973 RBBP4P6-201ENST00000508098 202 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 AC104806.1-201ENST00000508720 308 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 RNA5SP401-201ENST00000515920 127 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 RNU6-123P-201ENST00000516163 102 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 Y_RNA.689-201ENST00000516589 107 ntBASIC4.39□□□□□ -1.71
CNGA1P29973 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms