Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 RN7SKP111-201ENST00000410349 271 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.14□□□□□ -1.75
SMARCA1P28370 GOT2P5-201ENST00000433995 546 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 HSPD1P21-201ENST00000436541 245 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 DDX3P2-201ENST00000446138 111 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 RPL23AP31-201ENST00000456160 467 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 RN7SL330P-201ENST00000469709 307 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.14□□□□□ -1.75
SMARCA1P28370 AC117522.1-201ENST00000509821 380 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.14□□□□□ -1.75
SMARCA1P28370 RN7SKP13-201ENST00000515933 244 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 SNORA31.8-201ENST00000516327 108 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 RN7SKP289-201ENST00000517244 295 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.14□□□□□ -1.75
SMARCA1P28370 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.14□□□□□ -1.75
SMARCA1P28370 AF235103.2-201ENST00000525753 346 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SMARCA1P28370 OR5BN1P-201ENST00000532955 829 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMARCA1P28370 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.14□□□□□ -1.75
SMARCA1P28370 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.14□□□□□ -1.75
SMARCA1P28370 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.14□□□□□ -1.75
SMARCA1P28370 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.14□□□□□ -1.75
SMARCA1P28370 AC055876.1-202ENST00000567053 138 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 AC024619.4-201ENST00000580924 316 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 MIR4775-201ENST00000581168 75 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 AP001029.3-201ENST00000588063 596 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.14□□□□□ -1.75
SMARCA1P28370 MIR92B-201ENST00000607575 96 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.14□□□□□ -1.75
SMARCA1P28370 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.14□□□□□ -1.75
SMARCA1P28370 AC024940.5-201ENST00000622889 474 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.14□□□□□ -1.75
SMARCA1P28370 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.14□□□□□ -1.75
SMARCA1P28370 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMARCA1P28370 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.13□□□□□ -1.75
SMARCA1P28370 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMARCA1P28370 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SMARCA1P28370 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMARCA1P28370 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SMARCA1P28370 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.13□□□□□ -1.75
SMARCA1P28370 RNA5SP119-201ENST00000362715 117 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 RNU6-960P-201ENST00000364056 120 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMARCA1P28370 AL391417.1-201ENST00000404100 426 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 AL354719.1-201ENST00000406535 843 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 RNA5SP129-201ENST00000410276 118 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 OR9R1P-201ENST00000412200 877 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.13□□□□□ -1.75
SMARCA1P28370 AC018630.2-202ENST00000422992 927 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.13□□□□□ -1.75
SMARCA1P28370 AC091286.1-201ENST00000431233 461 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.13□□□□□ -1.75
SMARCA1P28370 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMARCA1P28370 RPL21P23-201ENST00000446654 460 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 AC073415.1-201ENST00000449240 153 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.13□□□□□ -1.75
SMARCA1P28370 SNORD97-201ENST00000459187 142 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 MRPS17P3-201ENST00000465453 385 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 RN7SL594P-201ENST00000470590 287 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMARCA1P28370 AL163973.1-201ENST00000484753 577 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.13□□□□□ -1.75
SMARCA1P28370 AC110768.1-201ENST00000509222 400 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.13□□□□□ -1.75
SMARCA1P28370 RNU6-1092P-201ENST00000516955 87 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.13□□□□□ -1.75
SMARCA1P28370 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.13□□□□□ -1.75
SMARCA1P28370 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.13□□□□□ -1.75
SMARCA1P28370 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.13□□□□□ -1.75
SMARCA1P28370 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.13□□□□□ -1.75
SMARCA1P28370 AC008945.2-201ENST00000606056 604 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SMARCA1P28370 AC110801.1-201ENST00000623590 212 ntBASIC4.13□□□□□ -1.75
SMARCA1P28370 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.13□□□□□ -1.75
SMARCA1P28370 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.13□□□□□ -1.75
SMARCA1P28370 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SMARCA1P28370 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.13□□□□□ -1.75
SMARCA1P28370 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.13□□□□□ -1.75
SMARCA1P28370 AL353746.1-201ENST00000566293 6881 ntBASIC4.12□□□□□ -1.75
SMARCA1P28370 AC009812.4-201ENST00000569134 1805 ntBASIC4.12□□□□□ -1.75
SMARCA1P28370 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMARCA1P28370 AC073343.1-201ENST00000328239 651 ntBASIC4.12□□□□□ -1.75
SMARCA1P28370 RNU6-50P-201ENST00000362356 103 ntBASIC4.12□□□□□ -1.75
SMARCA1P28370 SNORA62.1-201ENST00000364287 154 ntBASIC4.12□□□□□ -1.75
SMARCA1P28370 Y_RNA.255-201ENST00000364581 97 ntBASIC4.12□□□□□ -1.75
SMARCA1P28370 RNU6-283P-201ENST00000364788 107 ntBASIC4.12□□□□□ -1.75
SMARCA1P28370 RNU6-996P-201ENST00000365438 107 ntBASIC4.12□□□□□ -1.75
SMARCA1P28370 RNU6-76P-201ENST00000384060 104 ntBASIC4.12□□□□□ -1.75
SMARCA1P28370 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.12□□□□□ -1.75
SMARCA1P28370 RN7SKP53-201ENST00000411337 315 ntBASIC4.12□□□□□ -1.75
SMARCA1P28370 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.12□□□□□ -1.75
SMARCA1P28370 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.12□□□□□ -1.75
SMARCA1P28370 MTCYBP8-201ENST00000422855 651 ntBASIC4.12□□□□□ -1.75
SMARCA1P28370 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.12□□□□□ -1.75
SMARCA1P28370 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.12□□□□□ -1.75
SMARCA1P28370 RPL26P6-201ENST00000440913 438 ntBASIC4.12□□□□□ -1.75
SMARCA1P28370 MTND3P10-201ENST00000450967 341 ntBASIC4.12□□□□□ -1.75
SMARCA1P28370 GMFBP1-201ENST00000467831 427 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms