Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL591416.1-201ENST00000404015 867 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AL136310.1-201ENST00000404926 654 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AL356379.1-201ENST00000414105 126 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 RPS3AP37-201ENST00000419176 745 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 EIF4EP4-201ENST00000424916 578 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 MYL8P-204ENST00000431574 518 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 FCF1P1-201ENST00000432690 571 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC105272.1-201ENST00000438604 198 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC016691.1-201ENST00000441321 413 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 MTND2P39-201ENST00000457230 764 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 SNORD121B-201ENST00000458838 81 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 SNORD109B-201ENST00000458961 67 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 SNORD109A-201ENST00000459128 67 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC005410.1-202ENST00000460347 485 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC025033.1-201ENST00000463883 194 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC026436.1-201ENST00000510537 270 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 RNA5SP320-201ENST00000516263 124 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 OR6C7P-201ENST00000547875 934 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 MIR5195-201ENST00000583555 115 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC091057.3-201ENST00000602684 733 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 BBIP1P1-201ENST00000602999 279 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AL157392.4-201ENST00000609756 345 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AL392048.1-201ENST00000613946 534 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AP001486.3-201ENST00000615334 372 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AL357080.1-201ENST00000617394 239 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC006386.1-201ENST00000619436 415 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC092608.2-201ENST00000624427 218 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC010608.3-201ENST00000625048 527 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AL109809.4-201ENST00000603520 2185 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 AL079343.1-201ENST00000572358 1771 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DMAP28067 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DMAP28067 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 ZNF833P-201ENST00000424938 1494 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC016717.2-201ENST00000609089 5141 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 RNU6-1207P-201ENST00000384343 107 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 MIR17-201ENST00000385012 84 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 CYCSP48-201ENST00000417124 323 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 USP9YP11-201ENST00000427537 717 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 ZYG11AP1-201ENST00000430329 837 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 ARL5AP4-201ENST00000430731 512 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 RPS15AP28-201ENST00000435088 386 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 RPL26P9-201ENST00000457466 433 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC080013.2-201ENST00000460866 323 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC026801.2-201ENST00000515352 425 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 RNU7-193P-201ENST00000516723 65 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 MIR514B-201ENST00000516774 80 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 MTND2P7-201ENST00000521337 640 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 COX6CP8-201ENST00000522620 226 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 MTCYBP23-201ENST00000558717 1102 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC105137.2-201ENST00000569073 466 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 MIR3935-201ENST00000583472 104 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC078899.2-201ENST00000595282 212 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC012468.1-201ENST00000604888 430 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DMAP28067 AP003400.5-201ENST00000624827 617 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 AL159972.1-201ENST00000625150 448 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC004520.1-201ENST00000608362 1413 ntBASIC1.96□□□□□ -2.1
HLA-DMAP28067 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DMAP28067 AC009487.4-201ENST00000624969 3585 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DMAP28067 RNU6-114P-201ENST00000384704 105 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HLA-DMAP28067 AL445529.1-201ENST00000398713 389 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DMAP28067 RNU2-52P-201ENST00000410680 190 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DMAP28067 MTCO2P20-201ENST00000437339 673 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 MTND4P6-201ENST00000438297 472 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 SDR42E1P3-201ENST00000438345 502 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC124916.1-201ENST00000444020 547 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DMAP28067 RPL23AP7-203ENST00000449021 469 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms