Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH3P22223 KC877982.1-201ENST00000602313 470 ntBASIC3.1□□□□□ -1.91
CDH3P22223 AC090970.3-201ENST00000612566 866 ntBASIC3.1□□□□□ -1.91
CDH3P22223 AP001506.1-201ENST00000615444 211 ntBASIC3.1□□□□□ -1.91
CDH3P22223 uc_338.12-201ENST00000616344 181 ntBASIC3.1□□□□□ -1.91
CDH3P22223 AC092656.1-203ENST00000624134 423 ntBASIC3.1□□□□□ -1.91
CDH3P22223 AL136313.1-201ENST00000624804 202 ntBASIC3.1□□□□□ -1.91
CDH3P22223 AC005832.2-201ENST00000538921 1430 ntBASIC3.1□□□□□ -1.91
CDH3P22223 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH3P22223 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CDH3P22223 DEFB108F-201ENST00000344638 222 ntBASIC3.09□□□□□ -1.91
CDH3P22223 RNU6-223P-201ENST00000362830 107 ntBASIC3.09□□□□□ -1.91
CDH3P22223 RNA5SP374-201ENST00000362939 125 ntBASIC3.09□□□□□ -1.91
CDH3P22223 U8.3-201ENST00000363321 132 ntBASIC3.09□□□□□ -1.91
CDH3P22223 RNU6-525P-201ENST00000363685 104 ntBASIC3.09□□□□□ -1.91
CDH3P22223 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH3P22223 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CDH3P22223 RNU1-39P-201ENST00000383897 165 ntBASIC3.09□□□□□ -1.91
CDH3P22223 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CDH3P22223 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.09□□□□□ -1.91
CDH3P22223 AC009961.2-201ENST00000435771 251 ntBASIC3.09□□□□□ -1.91
CDH3P22223 AC005094.1-201ENST00000440420 368 ntBASIC3.09□□□□□ -1.91
CDH3P22223 ELOCP30-201ENST00000447108 299 ntBASIC3.09□□□□□ -1.91
CDH3P22223 Z99127.3-201ENST00000448158 395 ntBASIC3.09□□□□□ -1.91
CDH3P22223 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH3P22223 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH3P22223 snoU109.1-201ENST00000459339 135 ntBASIC3.09□□□□□ -1.91
CDH3P22223 HSPE1P6-201ENST00000479457 291 ntBASIC3.09□□□□□ -1.91
CDH3P22223 MTCO3P7-201ENST00000510008 774 ntBASIC3.09□□□□□ -1.91
CDH3P22223 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH3P22223 RNA5SP217-201ENST00000515959 91 ntBASIC3.09□□□□□ -1.91
CDH3P22223 Y_RNA.672-201ENST00000516289 104 ntBASIC3.09□□□□□ -1.91
CDH3P22223 RNU1-143P-201ENST00000516296 146 ntBASIC3.09□□□□□ -1.91
CDH3P22223 SNORA70.16-201ENST00000516390 95 ntBASIC3.09□□□□□ -1.91
CDH3P22223 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH3P22223 HMGN1P28-201ENST00000521340 364 ntBASIC3.09□□□□□ -1.91
CDH3P22223 AC135279.1-201ENST00000543493 504 ntBASIC3.09□□□□□ -1.91
CDH3P22223 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH3P22223 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH3P22223 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH3P22223 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH3P22223 AC005951.2-201ENST00000576282 495 ntBASIC3.09□□□□□ -1.91
CDH3P22223 NUTF2P8-201ENST00000604593 363 ntBASIC3.09□□□□□ -1.91
CDH3P22223 AC106900.2-201ENST00000604994 317 ntBASIC3.09□□□□□ -1.91
CDH3P22223 AL451064.1-201ENST00000607718 471 ntBASIC3.09□□□□□ -1.91
CDH3P22223 U1.23-201ENST00000610293 146 ntBASIC3.09□□□□□ -1.91
CDH3P22223 RNU1-68P-201ENST00000615382 146 ntBASIC3.09□□□□□ -1.91
CDH3P22223 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH3P22223 U1.39-201ENST00000621562 146 ntBASIC3.09□□□□□ -1.91
CDH3P22223 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH3P22223 AC099654.7-201ENST00000635788 2127 ntBASIC3.09□□□□□ -1.91
CDH3P22223 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CDH3P22223 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH3P22223 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH3P22223 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH3P22223 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDH3P22223 GNG5P1-201ENST00000255500 204 ntBASIC3.08□□□□□ -1.92
CDH3P22223 OR1S2-201ENST00000302592 978 ntBASIC3.08□□□□□ -1.92
CDH3P22223 Y_RNA.194-201ENST00000363985 102 ntBASIC3.08□□□□□ -1.92
CDH3P22223 RNY3P13-201ENST00000365542 102 ntBASIC3.08□□□□□ -1.92
CDH3P22223 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH3P22223 TMEM167AP1-201ENST00000423409 219 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH3P22223 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH3P22223 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.08□□□□□ -1.92
CDH3P22223 MTCO3P45-201ENST00000443036 613 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AC244505.5-201ENST00000443639 207 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH3P22223 GAPDHP17-201ENST00000449858 1001 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.08□□□□□ -1.92
CDH3P22223 MTND1P12-201ENST00000455231 147 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.08□□□□□ -1.92
CDH3P22223 AC108059.3-201ENST00000456388 214 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH3P22223 TPT1P7-201ENST00000458300 517 ntBASIC3.08□□□□□ -1.92
CDH3P22223 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDH3P22223 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.08□□□□□ -1.92
CDH3P22223 NDUFB4P2-201ENST00000509515 391 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH3P22223 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDH3P22223 AC123904.3-201ENST00000547218 814 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH3P22223 MIR4528-201ENST00000577763 90 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AC103987.3-201ENST00000582071 292 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH3P22223 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH3P22223 GLUD1P4-201ENST00000590914 418 ntBASIC3.08□□□□□ -1.92
CDH3P22223 RPL23AP78-201ENST00000599928 470 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH3P22223 AC090578.1-201ENST00000604955 591 ntBASIC3.08□□□□□ -1.92
CDH3P22223 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH3P22223 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH3P22223 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDH3P22223 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH3P22223 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AC100793.4-201ENST00000613683 429 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AC011939.3-201ENST00000613686 466 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AC138932.5-201ENST00000617759 563 ntBASIC3.08□□□□□ -1.92
CDH3P22223 LRRC77P-213ENST00000637727 880 ntBASIC3.08□□□□□ -1.92
CDH3P22223 AC068137.4-201ENST00000638485 296 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms