Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 U3.12-201ENST00000364498 214 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 Y_RNA.315-201ENST00000365117 102 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 Y_RNA.387-201ENST00000383918 102 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 Y_RNA.394-201ENST00000383942 103 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 SNORA56-201ENST00000383966 129 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 RNU6-213P-201ENST00000384051 104 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 RNU6-1013P-201ENST00000384180 107 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 RNU4-46P-201ENST00000410818 138 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 SNORA57.3-201ENST00000411095 141 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 RAC1P6-201ENST00000423911 575 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 MTCO2P12-201ENST00000427426 682 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 CALM2P2-201ENST00000428512 440 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AL117339.2-201ENST00000430475 180 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 MRPS18BP2-201ENST00000434310 759 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 MTCO3P45-201ENST00000443036 613 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AL162389.1-201ENST00000449233 177 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 MRPS31P2-201ENST00000451581 518 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 SNRPGP5-201ENST00000456003 220 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AL162395.1-201ENST00000457882 422 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AC008481.1-201ENST00000463278 396 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 RN7SL323P-201ENST00000494712 295 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 TOMM20P2-201ENST00000540082 421 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AL121821.2-201ENST00000556081 394 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AC024619.4-201ENST00000580924 316 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AL606490.9-201ENST00000603331 271 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AL133255.1-201ENST00000606374 441 ntBASIC3.4□□□□□ -1.87
TNFRSF1BP20333 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFRSF1BP20333 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AP001350.1-201ENST00000601906 1524 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AL137003.2-201ENST00000606924 2538 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AL139811.1-201ENST00000424779 2299 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 RNU6-1287P-201ENST00000362914 107 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 RNU6-188P-201ENST00000364207 107 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 RNA5SP42-201ENST00000364278 115 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 SNORD115-7-201ENST00000365306 82 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 RNU6-61P-201ENST00000365528 109 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 Y_RNA.373-201ENST00000365600 103 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 SNORA24.1-201ENST00000384401 135 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 RNU1-13P-201ENST00000384499 162 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 SNORA70C-201ENST00000384538 135 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 RNU6-831P-201ENST00000384548 107 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 RNU6-1060P-201ENST00000384664 107 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AL138878.1-201ENST00000405131 347 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 RPS7P15-201ENST00000415804 584 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AC018644.1-201ENST00000429934 551 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 OR4C10P-201ENST00000434991 931 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 RPL23AP33-201ENST00000442301 452 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AL121871.1-201ENST00000443413 436 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 snoU13.3-201ENST00000459441 104 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 RNU6-1208P-201ENST00000459588 107 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AC084357.1-201ENST00000473404 255 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 Y_RNA.654-201ENST00000497848 106 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 RPL23AP55-201ENST00000498163 452 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 TTC39CP1-201ENST00000512513 755 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 NDUFB9P3-201ENST00000521269 501 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AL137161.1-201ENST00000532231 390 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AC026464.5-201ENST00000562497 722 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AC244505.7-201ENST00000599675 272 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AL390240.1-201ENST00000612950 384 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 TUG1_2.1-201ENST00000614234 87 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 AC010205.1-201ENST00000616668 449 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 C2orf27A-204ENST00000623058 969 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 MIR4275-201ENST00000636486 87 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 API5P2-201ENST00000397055 1498 ntBASIC3.39□□□□□ -1.87
TNFRSF1BP20333 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFRSF1BP20333 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms