Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.3□□□□□ -1.72
ATF3P18847 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.3□□□□□ -1.72
ATF3P18847 AGGF1P4-201ENST00000568249 801 ntBASIC4.3□□□□□ -1.72
ATF3P18847 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.3□□□□□ -1.72
ATF3P18847 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.3□□□□□ -1.72
ATF3P18847 AC068790.2-201ENST00000602601 557 ntBASIC4.3□□□□□ -1.72
ATF3P18847 AC073648.5-201ENST00000603502 305 ntBASIC4.3□□□□□ -1.72
ATF3P18847 NDUFA8P1-201ENST00000605525 367 ntBASIC4.3□□□□□ -1.72
ATF3P18847 AC091834.1-201ENST00000614543 472 ntBASIC4.3□□□□□ -1.72
ATF3P18847 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.3□□□□□ -1.72
ATF3P18847 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.3□□□□□ -1.72
ATF3P18847 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATF3P18847 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.3□□□□□ -1.72
ATF3P18847 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATF3P18847 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.29□□□□□ -1.72
ATF3P18847 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATF3P18847 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATF3P18847 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
ATF3P18847 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
ATF3P18847 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
ATF3P18847 HSPE1P11-201ENST00000339579 310 ntBASIC4.29□□□□□ -1.72
ATF3P18847 RNY1P12-201ENST00000364251 105 ntBASIC4.29□□□□□ -1.72
ATF3P18847 SNORA20.2-201ENST00000383922 131 ntBASIC4.29□□□□□ -1.72
ATF3P18847 AL591034.1-201ENST00000407447 340 ntBASIC4.29□□□□□ -1.72
ATF3P18847 RN7SKP140-201ENST00000411196 284 ntBASIC4.29□□□□□ -1.72
ATF3P18847 AL451054.2-201ENST00000420896 202 ntBASIC4.29□□□□□ -1.72
ATF3P18847 UBE2D3P2-201ENST00000424409 445 ntBASIC4.29□□□□□ -1.72
ATF3P18847 AC007283.2-201ENST00000424739 197 ntBASIC4.29□□□□□ -1.72
ATF3P18847 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.29□□□□□ -1.72
ATF3P18847 AC020550.1-201ENST00000447385 163 ntBASIC4.29□□□□□ -1.72
ATF3P18847 AL513124.1-201ENST00000450410 614 ntBASIC4.29□□□□□ -1.72
ATF3P18847 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.29□□□□□ -1.72
ATF3P18847 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATF3P18847 KCTD9P5-201ENST00000504141 1170 ntBASIC4.29□□□□□ -1.72
ATF3P18847 HIGD1AP13-201ENST00000509878 289 ntBASIC4.29□□□□□ -1.72
ATF3P18847 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.29□□□□□ -1.72
ATF3P18847 AC124947.2-202ENST00000552735 133 ntBASIC4.29□□□□□ -1.72
ATF3P18847 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.29□□□□□ -1.72
ATF3P18847 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.29□□□□□ -1.72
ATF3P18847 AC098614.4-201ENST00000607601 462 ntBASIC4.29□□□□□ -1.72
ATF3P18847 AL161734.1-201ENST00000609720 557 ntBASIC4.29□□□□□ -1.72
ATF3P18847 AC090132.2-201ENST00000615881 347 ntBASIC4.29□□□□□ -1.72
ATF3P18847 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.29□□□□□ -1.72
ATF3P18847 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.29□□□□□ -1.72
ATF3P18847 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATF3P18847 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
ATF3P18847 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATF3P18847 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.28□□□□□ -1.72
ATF3P18847 SNORD67-201ENST00000390833 111 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AL513331.1-201ENST00000411908 397 ntBASIC4.28□□□□□ -1.72
ATF3P18847 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.28□□□□□ -1.72
ATF3P18847 PIGFP2-201ENST00000421400 651 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.28□□□□□ -1.72
ATF3P18847 AC063976.3-201ENST00000426849 329 ntBASIC4.28□□□□□ -1.72
ATF3P18847 DLGAP5P1-201ENST00000430307 464 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.28□□□□□ -1.72
ATF3P18847 NDUFB4P6-201ENST00000436819 366 ntBASIC4.28□□□□□ -1.72
ATF3P18847 RPS4XP2-201ENST00000458402 793 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.28□□□□□ -1.72
ATF3P18847 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.28□□□□□ -1.72
ATF3P18847 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.28□□□□□ -1.72
ATF3P18847 RNU6-1256P-201ENST00000516539 103 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AC022616.3-201ENST00000523940 148 ntBASIC4.28□□□□□ -1.72
ATF3P18847 ARL2BPP2-201ENST00000550907 489 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.28□□□□□ -1.72
ATF3P18847 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.28□□□□□ -1.72
ATF3P18847 AL670379.6-201ENST00000603753 252 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AC091805.2-201ENST00000603848 235 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AL670379.11-201ENST00000604059 253 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AL161729.4-201ENST00000604650 476 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AC008162.1-201ENST00000604718 254 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AL670379.1-201ENST00000604752 252 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AL670379.5-201ENST00000605253 252 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AL670379.12-201ENST00000605291 253 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AL670379.8-201ENST00000605353 252 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AL670379.7-201ENST00000605823 252 ntBASIC4.28□□□□□ -1.72
ATF3P18847 AL390240.1-201ENST00000612950 384 ntBASIC4.28□□□□□ -1.72
ATF3P18847 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ATF3P18847 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATF3P18847 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ATF3P18847 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.27□□□□□ -1.73
ATF3P18847 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.27□□□□□ -1.73
ATF3P18847 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.27□□□□□ -1.73
ATF3P18847 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.27□□□□□ -1.73
ATF3P18847 Y_RNA.582-201ENST00000391023 95 ntBASIC4.27□□□□□ -1.73
ATF3P18847 RNU2-36P-201ENST00000410361 191 ntBASIC4.27□□□□□ -1.73
ATF3P18847 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF3P18847 MTCO3P41-201ENST00000414801 328 ntBASIC4.27□□□□□ -1.73
ATF3P18847 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.27□□□□□ -1.73
ATF3P18847 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF3P18847 AL645937.1-202ENST00000421799 937 ntBASIC4.27□□□□□ -1.73
ATF3P18847 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF3P18847 RPL31P35-201ENST00000431058 377 ntBASIC4.27□□□□□ -1.73
ATF3P18847 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.27□□□□□ -1.73
ATF3P18847 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF3P18847 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.27□□□□□ -1.73
ATF3P18847 RNU7-51P-201ENST00000516560 62 ntBASIC4.27□□□□□ -1.73
ATF3P18847 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.27□□□□□ -1.73
ATF3P18847 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF3P18847 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms